Gene Bcen2424_3801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3801 
Symbol 
ID4452293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp663045 
End bp664163 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID639695859 
ProductAraC family transcriptional regulator 
Protein accessionYP_837431 
Protein GI116691898 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCAG CAGATCAGCG GTGGGTCGTT ATCTATTTGA GTACGGGGTT TTCGTTGGCC 
CAGGCCGCGC GCCTCGGCGA AGCCTTCAAC CTGGCGAATC GCCTGCATGC GTACAGCGCG
GATTACCAGC TCAAGTACGT ATCCGAAAGC GGGGGACTGT TGCAGTCGTC GTCCGGCGTG
CGCATCGCGG CCGAGCCGTT CGGCGACGAA CATAGCCGCC GTGCGCGCGC GTTCTTTCAT
CTTCATGGCG AGCGCGCGGC CGTCAATTGG GACGACGCAT TGCAGCGGCG CCTGTCCGAC
ATTCGCCAGC ATGCGCGCTG GATCGTCGAT GCGATGGAGT TGCCCGCGCT CGCCGCCACG
CGGCGGCCGT CGTCGTCAAT CGACGTGCGG CCCGGCCGGG CCGGGCGCCG CGCCACCACG
ACGATCGAAT TGCAGGCCGG CGAGACCGAC GTGTTCGCCG CCGCGCTCGA CATGTTTCGC
GTCGACCTCG GCGACGGCGC CGCGCAGGAG ATCGCCAGCA ACATGATGCG GCCGGTCGAG
CAGCGCTACG CGCAGTCGAT GTGGGCGTTT CGCGAACTGA GCGCGAGCCC GTCGATCCGG
ATGTCCGCGC AGCGGTTGCG TGCGCAGAGC GTGAACCGCA TCTCGATCGC GAACGCCGCG
CAGGCGGCCG CGATGAGCGA GCGCAATTTC CTGCGGCGCT TCAAGAAGGA AATCGGCGTG
ACGCCGACCG AGTTCGTCCA GCACGTGCGG CTCGAGCGGG CGTGCCACAT GCTGATCCAT
ACGACGCTGC CGGCCGACAA GGTCGCGCGG CGCACCGGCT TCGGCAGCGG CGAGCGGCTC
GCGAAGCTGT TTCGTCAGCG GCTGTTGATG TCGCCGACCG AATTTCGCGT CGCCGAGCGG
GAAAAGATCC TCGCGCACGG CGCGGCGTCG CCCGATCCTG ACGAACGGCT TGCCGCCGCG
TGTTGCGACG GCGACGGGGC GGATTGCGAC GCCTGCGTGG CCGCGCGCGG GAAAACGGGA
CGGATACCCG TAAAATCGAC GGATCGCGAT CTCGATTCCC GGTTTCCATG CCCTTCCTCC
CCACTACCGC CACCGCCCCT TTCTGCCCGT CGGAAGTAA
 
Protein sequence
MNAADQRWVV IYLSTGFSLA QAARLGEAFN LANRLHAYSA DYQLKYVSES GGLLQSSSGV 
RIAAEPFGDE HSRRARAFFH LHGERAAVNW DDALQRRLSD IRQHARWIVD AMELPALAAT
RRPSSSIDVR PGRAGRRATT TIELQAGETD VFAAALDMFR VDLGDGAAQE IASNMMRPVE
QRYAQSMWAF RELSASPSIR MSAQRLRAQS VNRISIANAA QAAAMSERNF LRRFKKEIGV
TPTEFVQHVR LERACHMLIH TTLPADKVAR RTGFGSGERL AKLFRQRLLM SPTEFRVAER
EKILAHGAAS PDPDERLAAA CCDGDGADCD ACVAARGKTG RIPVKSTDRD LDSRFPCPSS
PLPPPPLSAR RK