Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3774 |
Symbol | |
ID | 4451738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 632378 |
End bp | 633337 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639695832 |
Product | AraC family transcriptional regulator |
Protein accession | YP_837404 |
Protein GI | 116691871 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.425956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCAA CGTCGTTCGA GCCGCTCGCG CTGCGCGCGC ACCGGCTGTT CGAATCCCGC GATCTCGACG AGACGCGCGA GCGAATCTCG CGCGTGATGC AGCCGCACGC GCTGCTGCCG AGCGGCCGTG TGCGGGGTGC GTCGCACATG GATTTCGTCA AGCTGGGCGG GCTCGGGATC GGCACGATCG CGTTCGGCGA CGCGATGCGC GTGCAGGTCG ATGCCGTCGA CGGCTACTAC CTGCTGATGT TCTGCCTGTC CGGGCAGGCC GAAGTGCGCG CGATGGGGCG GCAACTCGGC GTCGATGGCC AGACCGGCGT GCTGTGCGCG CCCGGCGAGC GCTTCGACGC GGTGCTGTCG GCCGATTGCG AGCAGTTCGT GCTGCGCATC GACGCGGCGA CCGTCGGCGC GCTGACCGGC AACCCGCGCG CGATGCTCGA CCCGGTGCTG CACGTGAGCG ACACCGCACT CGCCGCGTGG CGCCAGCAAC TGATGCTCGT CGCGCGGTCG CCCGAGCTGC TGGAACGTGC GAACGCGAAC CCGCGGGTCG CGTCGCAGCT CGAGCATCTG CTGATCGACC TGCTGATCGA AGGCCATCCG CCGTCGGTGC TGCAGGCGGC GCACCGCGAC CCGGCGCCGG GTTTCGTGCG GCGCGCGCAG GAGTTCGTCG ATGCGCACTA CGCGCAGCCG CTGCAGCTCG CCGATATCGT CCAGGCCGCC AACGTGCCCG AACGGACGCT GCGCGATGCG TTCCTGCAAT TCCGCGGGAT GAGCCCGATG CAATACCTGC GCGCGACGCG GCTCGCGCAC GCGCGCGAAC TGCTGCGCGG CGCGGCATCG GACCGGCGGA TTGCCGATAT CGCGCTCGAT TGCGGGTTTA CCCACCTGGG CCGGTTCGCG ATCGCGTATC GGGAGAAGTT CGGCGAATCG CCGTCGGAAA CGCTCGACGC CAGGCGCTGA
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Protein sequence | MSPTSFEPLA LRAHRLFESR DLDETRERIS RVMQPHALLP SGRVRGASHM DFVKLGGLGI GTIAFGDAMR VQVDAVDGYY LLMFCLSGQA EVRAMGRQLG VDGQTGVLCA PGERFDAVLS ADCEQFVLRI DAATVGALTG NPRAMLDPVL HVSDTALAAW RQQLMLVARS PELLERANAN PRVASQLEHL LIDLLIEGHP PSVLQAAHRD PAPGFVRRAQ EFVDAHYAQP LQLADIVQAA NVPERTLRDA FLQFRGMSPM QYLRATRLAH ARELLRGAAS DRRIADIALD CGFTHLGRFA IAYREKFGES PSETLDARR
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