| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3766 |
|---|
| Symbol | |
|---|
| ID | 4451524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 624684 |
|---|
| End bp | 625577 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695824 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_837396 |
|---|
| Protein GI | 116691863 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.536746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.203175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC TCAGACGGCT CGATCTGAAC CTGCTCGTCA CGCTGGACGT GCTGCTCGCC
GAGCACAACG TCACGCGCGC GGCCGAGAAG CTGAACATGT CGCAGCCGTC GGTCAGCGTG
CAGCTGCAGA AACTGCGCGA CGTGTTCGGC GATCCGCTGC TGTTGCCCGG CCCGCGCGGG
ATGCGGCCGA CCGCGCGCGC GGAAGCGCTG CGCGAGCCGT TGCGCAATGC GCTCGAAGCG
GTCGAGCGCG CGGTGATCCC GGCCACGCCG TTCGATCCCG CGACCGCGAC GCACACGTGG
CGCGTGGCCG CGACCGACTA CGGCGAATCG ACGATCGTGC TGCCCGCGCT GCGCACGCTG
CGTTCGACCG CGCCCGGCAC GCGGCTCGCC GTCGTCGAAC TCGTGCCGCC GCGCATCGAG
CAGGATGCCG AACGAAACGG CATCGACCTG GCCTTCCATA CGACGGAAGG GTCGCCGCCC
GGCATGCGGC GCCTGCCGCT GTTCGTCGAG CGCTACGTGC TGATCGGCCG CGCCGGTCAT
CCGAAGCTGA AGCGGCGCCC GACGCTCGCG CAGTTCGCCA CGCTCGAACA CGTGATCGTG
TCGCCCGACG GCGGCGGCTT CTTCGGCGTG ACGGACGAAG TGCTCGCGAA GGCAGGGGCC
ACGCGGCGCG TCGTGCTGTC GGTGCCGCAC TTCCTGTTCG TGATGTCGGC CGTCGCGAGC
ACCGATCTCG TCGCGATGCT GCCCGAGCGG CTGGTGCGCG ACGTGCCCGC GCTGCGCGTG
GTGGACGCAC CGGTCGAGGT GCCCGGCTAT GAAATGTCGA TGCTGTGGCA CGAGCGCGTG
CATCGCGATC CCGCGCATCG GTGGTTGCGG GAGACGATTG CGGCGGCGGT GTAG
|
|---|
| Protein sequence | MNNLRRLDLN LLVTLDVLLA EHNVTRAAEK LNMSQPSVSV QLQKLRDVFG DPLLLPGPRG
MRPTARAEAL REPLRNALEA VERAVIPATP FDPATATHTW RVAATDYGES TIVLPALRTL
RSTAPGTRLA VVELVPPRIE QDAERNGIDL AFHTTEGSPP GMRRLPLFVE RYVLIGRAGH
PKLKRRPTLA QFATLEHVIV SPDGGGFFGV TDEVLAKAGA TRRVVLSVPH FLFVMSAVAS
TDLVAMLPER LVRDVPALRV VDAPVEVPGY EMSMLWHERV HRDPAHRWLR ETIAAAV
|
|---|
| |