Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3742 |
Symbol | |
ID | 4453027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 598209 |
End bp | 599525 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639695801 |
Product | major facilitator transporter |
Protein accession | YP_837373 |
Protein GI | 116691840 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0201656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGAA CGCTTTCCCC GCGCGCCGCA CCTTCCGTCG ATGCGGCGGT GCAACAGCGC CGCCGCGCCA TCGTCGCGAC CGTGATCGGC AACGGCCTCG AATGGTTCGA CTTCACCGTC TACAGCTTCT TCGCGGTGAT CATCGCGAAG CTGTTCTTCC CGACCGGCAA CGAACTGACG TCCGTGCTGC TCACCGTCGC GACGTTCGGC GTGGGCTTCT TCATGCGGCC GGTGGGCGGC ATCGTGCTGG GCGTCTATGC CGACAAGGTC GGACGCAAGG CAGCACTGTC GCTCACGATC CTGCTGATGG CGGCTGGCAC CGCGCTGATC GGCATCGCGC CGACCTACGA ACAAGCCGGC ATCGCCGCGC CGCTGATGAT CGTCGTCGCG CGGCTGCTGC AAGGCTTCTC GGCCGGCGGC GAAATGGGCG GCGCCACCGC GTTCCTCACC GAATACGCGC CGCCGGAAAA GCGCGCGTAT TACTCGAGCT GGATCCAGTC GAGCATCGGC TTCGCGGTGC TGCTCGGTGC GGCGACCGGC ACGTTCGTCA CGACGTCGCT CGACACGCAG GCGCTGCATA GCTGGGGCTG GCGGCTGCCG TTCCTGCTCG GGATCATCGT CGGGCCGGTC GGTTACTTCA TTCGCAGCCA TATCGACGAG ACGCCCGCGT TCAGCGCCGT CGAATCGCAG GCGAAGGAAA GCTCGCCGCT GAAGGAAGTG CTGCACACGT ATCCGCGCGA GACGTTCGCG AGTTTCTCGA TGGTGATCCT GTGGACCGTC TGCACCTACG TGCTGCTGTT CTACATGCCG ACCTATTCCG TGCGCACGCT GCATCTGCCG CAATCGACCG GTTTCACGGC CGGCATGGTC GGCGGGCTGA TGATCATGTG CTGCTCGCCG ATCGTCGGGC GCCTCGCCGA CGCGTGGGGA CGGCGCGTGT TCCTGTCCGG CTCCGCGCTC GCGATCCTCG TGCTCGCGTG GCCGATGTTC TCGTGGATCA ACCATGCGCC CGGGTTCGCG TCGCTGATCG TGTTCCAGGC CGTGTTCGGC GTGCTGATCG CGACCTATAC GGGGCCGATC CTCGCGGCGT TCGCGGAGCT GTTTCCGACC AAGGTACTGT CGACCGGATT ATCGGTTGCG TACAACTTCG CGGTGACGAT CTTCGGCGGG TTCGCGCCGT TCCTGATAAC GTGGCTCATC GCCCGGACCG GCAGCAACAT GGCGCCCGCG TTCTACGTGA TGCTCGCGGC GGCCGTCAGT TTCGTCGGCA CGCGCTTCGT GAAGGATGCG AAGCTTGCGG CCGCAACGAC TCGATAA
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Protein sequence | MQGTLSPRAA PSVDAAVQQR RRAIVATVIG NGLEWFDFTV YSFFAVIIAK LFFPTGNELT SVLLTVATFG VGFFMRPVGG IVLGVYADKV GRKAALSLTI LLMAAGTALI GIAPTYEQAG IAAPLMIVVA RLLQGFSAGG EMGGATAFLT EYAPPEKRAY YSSWIQSSIG FAVLLGAATG TFVTTSLDTQ ALHSWGWRLP FLLGIIVGPV GYFIRSHIDE TPAFSAVESQ AKESSPLKEV LHTYPRETFA SFSMVILWTV CTYVLLFYMP TYSVRTLHLP QSTGFTAGMV GGLMIMCCSP IVGRLADAWG RRVFLSGSAL AILVLAWPMF SWINHAPGFA SLIVFQAVFG VLIATYTGPI LAAFAELFPT KVLSTGLSVA YNFAVTIFGG FAPFLITWLI ARTGSNMAPA FYVMLAAAVS FVGTRFVKDA KLAAATTR
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