Gene Bcen2424_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3727 
Symbol 
ID4453756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp580349 
End bp581116 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID639695786 
ProductABC transporter related 
Protein accessionYP_837358 
Protein GI116691825 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.409478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0898326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGC TTACCGTTGA CAACCTGCAC AAGAAATTCG GCGACAACGA GGTGTTGAAG 
GGCGTGTCGA TGAGGGCGAA GGCCGGCGAC GTGATCAGCA TCATCGGCTC GAGCGGCTCA
GGCAAGAGCA CGTTCCTGCG CTGTATCAAC TTCCTCGAGC AGCCGTGTTC GGGGCAGATC
ACGATCGGCA GCGAGCCGAT CCAGACCACG CGCGACCGCA ACGGCTCGCT GCGCGTGGCC
GACCAGAAGC AGCTGCAGCG GATGCGCACG AAGCTGTCGA TGGTGTTCCA GCACTTCAAC
TTGTGGGCGC ACATGACGGT GCTGGAGAAC GTGATCGAGG CGCCGATGGC CGTGCTCGGC
GTCGGCAAGG ACGAGGCGAT CGACCGGGCG CGCAAGTATC TGGAGAAGGT CGGCCTCGCG
CCGCGCGTCG AGGGCATGTA TCCGTCGCAC CTGTCGGGCG GCCAGCAGCA GCGCGTGGCG
ATCGCGCGTG CGCTCGCGAT GGAGCCGGAA GTGATGCTGT TCGACGAACC GACGTCGGCG
CTCGACCCGG AACTGGTGGG CGAAGTGCTG AAGGTGATGC AGAAGCTCGC CGAGGAAGGC
CGCACGATGG TCGTCGTCAC GCACGAGATG GGCTTCGCGC GCAACGTGTC GAACCACGTG
ATCTTCCTGC ATCAGGGGAA GATCGAGGAA GAGGGCGATC CGCAGCAGAT TCTCGTGAAT
CCGAAGAGCG AGCGGCTCGG GCAGTTTCTG TCGGGGCGGT TGAAGTAA
 
Protein sequence
MYKLTVDNLH KKFGDNEVLK GVSMRAKAGD VISIIGSSGS GKSTFLRCIN FLEQPCSGQI 
TIGSEPIQTT RDRNGSLRVA DQKQLQRMRT KLSMVFQHFN LWAHMTVLEN VIEAPMAVLG
VGKDEAIDRA RKYLEKVGLA PRVEGMYPSH LSGGQQQRVA IARALAMEPE VMLFDEPTSA
LDPELVGEVL KVMQKLAEEG RTMVVVTHEM GFARNVSNHV IFLHQGKIEE EGDPQQILVN
PKSERLGQFL SGRLK