Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3726 |
Symbol | |
ID | 4453755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 579602 |
End bp | 580315 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639695785 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_837357 |
Protein GI | 116691824 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0910034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAAC TCGTCGGCCA GTACTGGCAA AGCTATCTCT ATTCCGACGG CTACCGCTTC AGCGGCCTCG CGATCACGCT GTGGCTGCTG GTCGTGTCGA TCGCGCTCGG TTTCGCGCTT GCGGTGCCGC TCGCGATCGC GCGGGCATCG TCGAACCGCT GGATCTCCGG CCCCGTGTGG CTCTATACGT ACGTGTTCCG CGGCACGCCG CTCTATGTGC AACTGCTGAT GTGCTACACG GGTATCTACA GCCTGCAGGT CGTGCACGAC CACGTGCTGC TCGACACGTT CTTCCGCAAT GCGATGAACT GCACGCTGCT CGCGTTCGTG CTGAACGAAT GCGCGTATGC GACGGAGATC TTCGCAGGCG CGATCAAGGC GACGTCGGCC GGCGAGATCG AGGCCGGGAT GGCCTACGGG ATGTCGCGCT TCAAGCTCTA TACGCGCATC GTCCTGCCGT CCGCGCTGCG TCGCTCGCTG CCGAGCTACA GCAACGAAGT GATCCTGATG CTGCACGCGA CGACGCTCGC GTTCACCGCG ACGGTGCCAG ACATCCTGAA GGTCACGCGC GACGTCAATT CGGCGACGTA CATGTCGTTC CAGGCCTACG GCATCGCGGC CGTGCTGTAC GCCGTCGTCG TGTTCGCGCT CATCTGGGCG TTCCGCAAGC TGGAGACGCG CTGGCTCGCG TATCTCTCGC CGCGCGGCCA CTAA
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Protein sequence | MIELVGQYWQ SYLYSDGYRF SGLAITLWLL VVSIALGFAL AVPLAIARAS SNRWISGPVW LYTYVFRGTP LYVQLLMCYT GIYSLQVVHD HVLLDTFFRN AMNCTLLAFV LNECAYATEI FAGAIKATSA GEIEAGMAYG MSRFKLYTRI VLPSALRRSL PSYSNEVILM LHATTLAFTA TVPDILKVTR DVNSATYMSF QAYGIAAVLY AVVVFALIWA FRKLETRWLA YLSPRGH
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