| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3714 |
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| Symbol | |
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| ID | 4453114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 566986 |
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| End bp | 568518 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639695773 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_837345 |
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| Protein GI | 116691812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.28391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0412955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAT TCCCGCTGCC CGCCACGCTG CGCCGCCATA CCGCGTCGAT CGTGGCACGC
ATTCTGTCGC CCCGCGGCGT ACTCGTGGCG GGCATCGTCC TGCTGATGTT CAGTTGGGGA
CTTTCCACGT CGCTATTAAT CGAGGCGCGA CGCGACGCGT ATGGCCATGC GGTCGAAAAT
GCGCGCAACC TGATGCTGCT GATCGAACGC GATATCGCGC GCAATATCGA ACTCTACGAT
TTGTCGCTGC AAAACGTCGT CGATGGCGTG GCCGATCCGG AACTGATGAC ATTGCCGCCG
CGCCAGCGCC ACCGGCTACT GTTCGATCGC GCGGCGACCG GCGCCTATCT CGGTTCGATT
TTCGTAATGG ATGCGCACGG CAATATCGCG ATCGATTCGA GCGCGTCGCC CGCGCGACAA
GGCAATTTCG CCGACCGCGA CTATTTCACC GTGCATCGCG ACCGGCTCGC CCCCGGCCTC
TACATCAGCC GGCCGTATGC GTCGCGGCTG CGCGGCGGCG CGTTGACGAT CGCGCTGAGC
CGCCGGATCA ACCGGCCCGA CGGCACCTTC GGCGGGATCG TCGTCGGCAC GCTCAGCATC
GACTACTTCC GCGCGCTGCT CGACGGCCTC GCGGTCGGCC GGCACGGCAG CGCGGCGATC
GTCGAGGACA ACGGCACGCT CGTATCGCGC CTGCCGTACG ACACCCGGGT GGTCGGCCTC
GACCTGCACG ACTCGCCGCT GTTCATCGAC GCGCAACGCA GCCGCACCGG CGAGCTGACC
GGGGTCGGCG CCATCGACGG CGTGCGGCGG GTCTATGTTT ACAAGCATCT CGCCGGGCTG
CCGCTGATCG TCGACGTCGC GCCCGCCGAG ATCGACATCT ACGCGTCGTG GCACCACCGC
GCGATCTGGA CCATCGTGCT GATGAGCCTG TTCACGGCGT TCATCGCGTG GGGCTCGCTC
GCGTTGTCGC GCGAGCTGAA ACGCCGGCAG GAGGCCGAAG CGAAGCTGTA CCGGCTCGCG
CACACCGATT CGCTGACGGG CCTCGACAAC CGCGGCACGT TCGACACGGT GCTCGCGAAG
GAGACCCAGC GCGCGTCGCG CAGCGGCCGG CCGTTGTCCG TGCTGTTCGT CGACGTCGAT
CACTTCAAGG CGTTCAACGA CTACTACGGC CACCCGGCCG GCGACGACGT GCTGCGCCAG
GTCGCGCAAT CGCTGTCGCG CTGCCTGCGC CGCGACAGCG ATCACGTCGC GCGCTACGGC
GGCGAGGAAT TCGTCGTCAC GCTGCCCGAC ACCGACGGGC CAGGCGCGGC CACCGTCGCC
GAAGGCATCC GGCGCGCGAT CGCGGAGCTC GGGATCGAGC ACGTGAAGAG CCAGTACGGG
CGCGTCACGG TCAGCATCGG CACGGCCACC GCGGACGACG GCCGGATGAA CGCCGCGACA
CTGTTGCGGC GCGCCGACGA AGCGCTGTAC CGCGCGAAGT CCGGCGGCCG CAACCGCGTG
CTGGACGCGC AGTCGACCGC GGCCGACGCG TGA
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| Protein sequence | MKSFPLPATL RRHTASIVAR ILSPRGVLVA GIVLLMFSWG LSTSLLIEAR RDAYGHAVEN
ARNLMLLIER DIARNIELYD LSLQNVVDGV ADPELMTLPP RQRHRLLFDR AATGAYLGSI
FVMDAHGNIA IDSSASPARQ GNFADRDYFT VHRDRLAPGL YISRPYASRL RGGALTIALS
RRINRPDGTF GGIVVGTLSI DYFRALLDGL AVGRHGSAAI VEDNGTLVSR LPYDTRVVGL
DLHDSPLFID AQRSRTGELT GVGAIDGVRR VYVYKHLAGL PLIVDVAPAE IDIYASWHHR
AIWTIVLMSL FTAFIAWGSL ALSRELKRRQ EAEAKLYRLA HTDSLTGLDN RGTFDTVLAK
ETQRASRSGR PLSVLFVDVD HFKAFNDYYG HPAGDDVLRQ VAQSLSRCLR RDSDHVARYG
GEEFVVTLPD TDGPGAATVA EGIRRAIAEL GIEHVKSQYG RVTVSIGTAT ADDGRMNAAT
LLRRADEALY RAKSGGRNRV LDAQSTAADA
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