Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3709 |
Symbol | |
ID | 4453109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 560709 |
End bp | 561791 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639695768 |
Product | tartrate dehydrogenase |
Protein accession | YP_837340 |
Protein GI | 116691807 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.51854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0942262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACCT ACCGTATCGC AACGATTCCC GGCGACGGCA TCGGCAAGGA GGTGGTGCCG GCTGGCAAGC AACTGCTGGA AGCGCTGGCC CGCAGCAGCG ACCGTTTCGC GTTCGAGTTC GAGGATTTCG ACTGGGGCGC CGATTACTAC CGCCGGCACG GCGCGATGAT GCCGGCCGAC GGCCTCGACG CACTGCGCGG CAAGGACGCG ATCCTGTTCG GCTCCGCGGG CGACCCGGAC GTGCCCGACC ACGTGACGCT GTGGGGGCTG CGCCTGAAGA TCTGCCAGGG CTTCGACCAG TACGCGAACG TGCGCCCGAC GCGCATCCTG CCCGGCATCG ACGCGCCGTT GAAGCGCTGC GGGCCGGACG ACCTGAACTG GGTGATCGTG CGCGAGAACT CCGAAGGCGA ATACGCGGGC GTCGGCGGCC GCGTGCACCA GGGCCATCCG ATCGAGGCCG CGACCGACGT GTCGATCCTC ACGCGCGCCG GCGTCGAACG CATCATGCGC TTCGCGTTCC GGCTTGCGCA GTCGCGGTCG CGCAAGCTGC TGACCGTGAT CACGAAGAGC AACGCGCAGC GGCACGCGAT GGTGATGTGG GACGAGATCG CGAAGCAGAT CGCGCAGGAG TTTCCCGACG TGACGTGGGA CAAGGAACTC GTCGATGCGG CGACCGCGCG CATGGTCAAT CGCCCGGCGT CGCTCGACAC GATCGTCGCG ACCAACCTGC ACGCGGACAT CCTCAGCGAT CTCGCCGCCG CGCTCGCGGG CAGCCTCGGC ATCGCGCCGA CCGGCAACAT CGATCCCGAG CGCCGCTATC CGTCGATGTT CGAGCCGATC CACGGCTCGG CGTTCGACAT CATGGGCAAG GGGCTCGCGA ATCCGGTCGG CACGTTCTGG TCGGTCGTGA TGCTGCTCGA ACATCTCGGC GAGACGGAAG CGGCCGCGCG CGTGATGCAT GCGATCGAGG CGGTGACGGC CGACCCGTCG CTGCATACGC GCGACCTCGG CGGCAGCGCG ACGACCGCGC AGGTGACGGC GGCCGTCTGC GAGCGCGTCG CGAACGCGGC GATCGCGGCC TGA
|
Protein sequence | MKTYRIATIP GDGIGKEVVP AGKQLLEALA RSSDRFAFEF EDFDWGADYY RRHGAMMPAD GLDALRGKDA ILFGSAGDPD VPDHVTLWGL RLKICQGFDQ YANVRPTRIL PGIDAPLKRC GPDDLNWVIV RENSEGEYAG VGGRVHQGHP IEAATDVSIL TRAGVERIMR FAFRLAQSRS RKLLTVITKS NAQRHAMVMW DEIAKQIAQE FPDVTWDKEL VDAATARMVN RPASLDTIVA TNLHADILSD LAAALAGSLG IAPTGNIDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW SVVMLLEHLG ETEAAARVMH AIEAVTADPS LHTRDLGGSA TTAQVTAAVC ERVANAAIAA
|
| |