| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3705 |
|---|
| Symbol | |
|---|
| ID | 4453105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 556997 |
|---|
| End bp | 557797 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695764 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_837336 |
|---|
| Protein GI | 116691803 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.14672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.18075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACC TTCCATCGAT CACCGATCCT GCCGCGGACG CCGACGTCTA TCACGTGCCG
CGTCCGCTCG TCGTGTTCGG CGGCTCGGTC GTCGAGCCCG AGTGGCGGCT GGAGCGGCAC
AGCCATCGCC AGGCGCAGCT GCTCTACACG CTGAGCGGGG TCATCTATTG CGAGATCGAC
GGCGGCGTGT GGACCGCGCC GCCGCAATGC ACGGTCTGGA TTCCCGGCGA TGTCCCGCAT
GCGGCGCGCG GCTCGGCCGG CGCCACTTTC TACGCGGTAC TGGTCGAACC CGACGCGGCG
CTCGACCTGC CCACGCGCTG CTGCACGCTC GCCATGTCGC CGCTGTTGCG CGAGCTGCTG
CTGAAGGCGG CCAGCTTCCC GAACCTGTAC GACGTCGACG GGCCGCAAGG GCGGCTGGTG
GCGACGCTGC TCGACGAGCT CGTCGCGGCC CCGGTCGAGG ACTTGTACTT GCCGATGCCG
GCCGATCGCC GGCTGCGCAA GCTGATCGAC CATCTGCTCG ACGACCCGGC CGACAAGTCG
CCGCTGCCCG AACTCGCGCG GCGTGCGGGC ATCAGCGAGC GCAGCCTGAC GCGCCTCGCG
ACGAAGGAGC TCGGCATGAG CCTCGGCGAC TGGCGCCGGC GGCTGCACGT CGCGCTGTCG
CTGCGGATGC TGACGACCGG CCGCCGCGTG CATCAGATCG CGATCGATCT CGGCTACGAG
AGCGCGAGCA GCTTCGTCAC GATGTTCCGC AAGGCGACCG GTAAGCCGCC GACGCAATTC
CTGACCGACC GGCAACGCTG A
|
|---|
| Protein sequence | MRDLPSITDP AADADVYHVP RPLVVFGGSV VEPEWRLERH SHRQAQLLYT LSGVIYCEID
GGVWTAPPQC TVWIPGDVPH AARGSAGATF YAVLVEPDAA LDLPTRCCTL AMSPLLRELL
LKAASFPNLY DVDGPQGRLV ATLLDELVAA PVEDLYLPMP ADRRLRKLID HLLDDPADKS
PLPELARRAG ISERSLTRLA TKELGMSLGD WRRRLHVALS LRMLTTGRRV HQIAIDLGYE
SASSFVTMFR KATGKPPTQF LTDRQR
|
|---|
| |