Gene Bcen2424_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3704 
Symbol 
ID4453104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp556204 
End bp556830 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content67% 
IMG OID639695763 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_837335 
Protein GI116691802 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.326067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.173855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TGACCACGCT GACCACCTTT ACGGCCGTCG TTCTGGGCCT GTTCCTGATC 
CCTGGCCCCG CCGTGCTGCT CGTGCTGAGC CGCACCGTGC AGGGTGGGCG CAAGACCGGC
ATCCTGACCG GCCTCGGCGT CGCGAGCGGC GACTTCGTGC ATACGCTGTT CGCGGCCGTC
GGGCTGTCGG CGCTGCTGAT GACGTCGGCA CTCGCGTTCA ACGTCGTGAA GCTGGTCGGC
GCCGCGTACC TGATCTATCT CGGCGTGCGG GCGCTGCTCG AGAAACCGTC CGATCCGTCG
CTGCCGCAGG TGTCGCCCGT CACGCCGCTC AAGGCGTACC TGCAGGCGAT TCCCGCCGAA
GTGCTGAATC CGAAGACCGC GCTGTTCTTT CTCGCGTTCA TGCCGCAGTT CGTGCATCCG
GAACGCGGCT CGACGTTCGT GCAGTTCGCG GTGCTCGGGC TGATCTTCGT CGTGCTCAGC
TCGCTCTACA CGACGCTGAT CGCATGCTCG ATCCGCCCGC TCGGCCGCAT CGTGAAGCGG
CTCACGTGGC TCACGCGCTG GCAGGGCAAG ATCATCGGCT CGATCTTCAT CGCGCTCGGG
CTGCGGGTAG CCGTGCAGCA GCGCTGA
 
Protein sequence
MFDLTTLTTF TAVVLGLFLI PGPAVLLVLS RTVQGGRKTG ILTGLGVASG DFVHTLFAAV 
GLSALLMTSA LAFNVVKLVG AAYLIYLGVR ALLEKPSDPS LPQVSPVTPL KAYLQAIPAE
VLNPKTALFF LAFMPQFVHP ERGSTFVQFA VLGLIFVVLS SLYTTLIACS IRPLGRIVKR
LTWLTRWQGK IIGSIFIALG LRVAVQQR