Gene Bcen2424_3684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3684 
Symbol 
ID4451793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp536431 
End bp537591 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content66% 
IMG OID639695742 
Productporin 
Protein accessionYP_837315 
Protein GI116691782 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.243056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTC CAGTTCGAAT CGTCATGATG TCAGGGGCGC TGCTGACGGC CGCGCACGCG 
GCTCATGCAA CGGAAGTCAC GCTGTACGGC CTGTTCGATA CATCGCTGAC GGTTGTGTGG
AATGCCGATG CACAAGGCAG GAACCTCGTC GGCCTCGGCA ACGGCAACCT GCTCGGCAAC
CGCTTCGGCG TGAAAGGCGC GGAAGATCTC GGCGGCGGGC TGAAAGCGAT CTTCACGCTG
GAAAACGGCT TCAACCCGAA CACCGGCGCG CTCGGGCAAG GCAACCGGAT GTTCGGCCGG
CAGGCGTTCG TCGGGCTGGA AAGCGCTCGC TGGGGAACAC TCACGCTCGG CCGCCAGTAC
GACGCGCTCG CCGATGTCGC GTGGCCGATC ACCGGCGATT TCTACTTCGG CAGCGTGTAC
GCGACGCCCG GCGACGTCGA CAACTACGAC ACGTCGTCGC GCACCGACAA CGCGGTGAAG
TACACGTCAC CCGTGGTCGG CGGCTTCCAG TTCGTCGGCA TGTACGCGCT CGGCGGCGTG
GCCGGCAAGA GCGGCGCCGG CCAAACCTGG TCGGCCGGCC TGTCGTACAA CCATGGCCCG
TTCGACGCGG CGGGCGGCTA CTACTATGCG GCCAACCGCG CCTCGCTCGC GAACGGCGTC
CGGACCGGCT GGAACGGCAC GTCGGACGGC ACGTTCGACG GGTCGCTGGT CAACGGCGGC
TACCTCTCGG CGAAGTCGAT CGGCATCGCA CGCGGCGCGT TGCGCTACAC CTTCGCGCCG
TTCACGATCG GTATCGATTA CAGCAATGCG CAGTACAAGG CCGATGCGAT GACGGCCTTT
CGCAGCACGC AGAAATACGA CACCGCGCGC GGGTTCTTCA ACTATCAGGC AACCGCGAGC
CTGCTCGTCG GCGTCGGCTA CAGCTACACG AAGGCCCGCG GCGATACGAG CGCGACCTAC
CATCAGGTGT CCGCCGGCGC CGACTACGTG CTGTCCAAGC GCACCGATCT CTATGCGGTC
GGCGCGTGGC AACGCGCGAA CGGCGAACAG CGCACGCTCG ACGGCGGCAC GCAGGCGGCG
CAGGCGTCGA TCGGCTCGTA CGGCTACGGC GGCACGCGCA CGCAGGGCAT CCTCAATCTC
GGTTTGCGCC ACCGCTTCTG A
 
Protein sequence
MKTPVRIVMM SGALLTAAHA AHATEVTLYG LFDTSLTVVW NADAQGRNLV GLGNGNLLGN 
RFGVKGAEDL GGGLKAIFTL ENGFNPNTGA LGQGNRMFGR QAFVGLESAR WGTLTLGRQY
DALADVAWPI TGDFYFGSVY ATPGDVDNYD TSSRTDNAVK YTSPVVGGFQ FVGMYALGGV
AGKSGAGQTW SAGLSYNHGP FDAAGGYYYA ANRASLANGV RTGWNGTSDG TFDGSLVNGG
YLSAKSIGIA RGALRYTFAP FTIGIDYSNA QYKADAMTAF RSTQKYDTAR GFFNYQATAS
LLVGVGYSYT KARGDTSATY HQVSAGADYV LSKRTDLYAV GAWQRANGEQ RTLDGGTQAA
QASIGSYGYG GTRTQGILNL GLRHRF