| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3666 |
|---|
| Symbol | |
|---|
| ID | 4452855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 515292 |
|---|
| End bp | 515948 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639695724 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_837297 |
|---|
| Protein GI | 116691764 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0498574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATA GCGGAATGGA GAAAGCACTC GAAACGGAAA AAAGGGGCCG GGCGTATGGC
GGCGTGGCGC CCGAGGTGCG GGCCGCCGAG CGGCGCGATG CGTTGATCCG TGCGGCGACG
CGCGTGTTCG GTACGGTGGG TTTCCGCAAG GCGACCGTGC GGTCGATCTG CCAGGAAGCG
AAGCTGAACG ATCGCTATTT CTACGCGGCG TTCGACAGCA CCGAGGATCT GTTGCGCTGC
ACTTACCTGC ATCACGCGCA GCAGCTGCAT GATGCGGTCG CGCAGGCGGT CGCCGCGCGC
GGCGGCGAGC TGCGCGAGCG CGTCGACGCG GGGCTCGCCG CATTCTTCGC GTTTCTGCGC
GACCCGTGCG CGGCGCGCGT GCTGCTGCTC GAGGTGATGG GCGTGAGCGC GGATACCGAC
ATGACGTACC AGCGCATGCT GATCGACTTC GGCAAGCTGA TCATGGCGAT CGGCGCGCCG
GGCGAGGCCG TCACGCCTGC CGAGCGCACC GAGCAGCGGC TGATCGGGCT CGCGCTGGTG
GGCGCGATGA CGAACGTCGG CGCGGCGTGG CTGCTGACCG ACTATCGCGA TCCGGAGGCG
CAGATGATCG CGAGTTGCAG GAAGGTGCTG CTGGGGACGT TGGGAACGGG CAGGTAG
|
|---|
| Protein sequence | MSNSGMEKAL ETEKRGRAYG GVAPEVRAAE RRDALIRAAT RVFGTVGFRK ATVRSICQEA
KLNDRYFYAA FDSTEDLLRC TYLHHAQQLH DAVAQAVAAR GGELRERVDA GLAAFFAFLR
DPCAARVLLL EVMGVSADTD MTYQRMLIDF GKLIMAIGAP GEAVTPAERT EQRLIGLALV
GAMTNVGAAW LLTDYRDPEA QMIASCRKVL LGTLGTGR
|
|---|
| |