Gene Bcen2424_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3661 
Symbol 
ID4452850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp508608 
End bp509918 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content75% 
IMG OID639695719 
Producttriple helix repeat-containing collagen 
Protein accessionYP_837292 
Protein GI116691759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.914344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCGC TCGGTACGAC GGTCGTAAAC GGCGGCGGTC AGATCGGCGG CGTGCAGATT 
CCCGGCACGA ACCCGACGAC GGCCACCAGC ATCGGCAACG CGGTCGGCAG CCTCGGCAAC
GGCGTGCAAT CGCTCGGCAA CGGCATCGCG GCCGGCCTGG GTTCGATCGG CGTGTCGGCG
AACCCGCTCG GGCCGACGAT CACGTCGACC ACCGGCCTGC TGACCGGCGC CGGCGGCGCG
GTCAACAACC TCGGCAATGC CGTGACGAGC CTCGGCACCG GTCCGCTGTC GCCGCTCGCG
CCCGCGACGA CCCTGGTCGG CAGCCTCGTC AACACGGTCG GCACCGCGGT CAACTCGACC
GCATCGGCGC TGAACACGGC ACTGAACAGC TCGCCGGTCC AGCAGCTCGA AACGCAGCTC
GGCAAGGTGA TCAACCCGAT CACGAACACG TTGACCGGCG GCGTCACGAC GCCGGGCGCC
ACGCAGACGC TCGGCGGCGT GACGCTGCTC GGCACGCCGC TCAACGGCCT GCTGAGCACG
CTCGGCAGCG GCCTCGGGCT CGCGGGCACG AAGGTCGGCG GCGCGACCGA CAACCCGGTC
GGCGCGGGCC TCGGCGGCGT CGTGACGCAG CTCGGCAACA CGGTGACGTC GACGGGCGGC
CTCGTCCACG ACAACAACGC GGGCAGCTCC AGCAGCGGCA CGGGCGGCAG CAATCCGCTC
GCGCCGATCA CGGGCCTGCT GGGCACGTTG ACGGGCGGCC TCGGCGGCGG CAGCTCGAGC
GGTTCGGGCG GCACCAGCGG CACCAGCAGC GGCGGCCCGC TCGCACCGAT CACCGGCCTG
CTCGGGACGG TGACGGGCGC ACTCGGCGGC ATCGGTTCGA GCGGCACCAG CGGCACGGGC
GGAACGAGCG GGACCGGCGG CACCAGCGGT ACGGGTGGCG CAGGCCTCGG CGGCCTGCTG
GCGCCGGTCA CCAATCTCGT CAACTCGCTG ACGCCGCTCG GCGCGAGCCT CACCGGCACC
GTCACGACGC CGGGCGGCAA CCTGTCCGGC ACGCTCGGCG GGGTGCTGAC GAGCGGCCCG
GTCGGCACGC TCACGGGTGC GCTGGGCACG CCGGCCGGCT CGGCCGGCGC CACCGGCACG
GTCAGCCCCG GCGGCGCAGC AGGCACCGTG ACGACGCCGG GCGGCAGCGG CTCCGTGGTG
ACCGGCCTGA CCGGCAGCAC GGGCGGCGCC GCCGCGGGCG GCACCGGCAA CCTGCTGTCG
CCGGTGACCA ACCTGCTCGG CGGTCTGCTG GGCGCCGGCA CCAAGAAGTA A
 
Protein sequence
MTALGTTVVN GGGQIGGVQI PGTNPTTATS IGNAVGSLGN GVQSLGNGIA AGLGSIGVSA 
NPLGPTITST TGLLTGAGGA VNNLGNAVTS LGTGPLSPLA PATTLVGSLV NTVGTAVNST
ASALNTALNS SPVQQLETQL GKVINPITNT LTGGVTTPGA TQTLGGVTLL GTPLNGLLST
LGSGLGLAGT KVGGATDNPV GAGLGGVVTQ LGNTVTSTGG LVHDNNAGSS SSGTGGSNPL
APITGLLGTL TGGLGGGSSS GSGGTSGTSS GGPLAPITGL LGTVTGALGG IGSSGTSGTG
GTSGTGGTSG TGGAGLGGLL APVTNLVNSL TPLGASLTGT VTTPGGNLSG TLGGVLTSGP
VGTLTGALGT PAGSAGATGT VSPGGAAGTV TTPGGSGSVV TGLTGSTGGA AAGGTGNLLS
PVTNLLGGLL GAGTKK