Gene Bcen2424_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3638 
Symbol 
ID4452897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp484827 
End bp485573 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID639695696 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_837269 
Protein GI116691736 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0316279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCA GGAACAAATC GGCGTTGATC ACGGGCGGCA CCAGCGGCAT CGGTCTGGCC 
ACCGCGAAGC TGTTCATTTC AGAAGGCGCG CGTGTCGCGG TGACGGGGCG CGACGAACGC
GTATTCGAGC GCGTGAAGGC GGAGCTCGGC GAGCATGCGG TCGTGCTCAA GGGCGATGTG
CGGTCGCTCG ACGACATGCG CGCGATTGCC GGCGAGGTTA ACGAGAGGTT CGGCGGTCTC
GACGTGGTAT TCGCCAATGC CGGCTGGGCG TTTCCGTCCG CCGTCAACGA CATCGACGAC
ACGCTGTACA ACGACATCAT GGACGTCAAC GTCAAGGGCG TGGTGTTCAC GCTTCAAGCG
GCGCTGCCGT ACTTGCGCGA AGGTTCGTCG GTGATCCTCA ATACCTCGTT CGTCGCGCAG
ACTGGCAAGC ACGGCATCTC GCTGACCGCC GCGGCGAAGG CCGCCGTGCG CTCGCTGGCC
CGCAGCTGGT CGTACGAATT TCTCGACCGG AAAATCCGCT TCAACGCGAT CGCGCCCGGC
GCGATCGATA CGCCGCTGCT TTCGAAGTGG GGCAAGCCCG ACGAATGGGT ACGCGACCGC
AAGGCCGAAT TCGCCGAAGC GATTCCGGTG GGCCGCATGG GCCACGCCGA CGACATCGCG
TACGCGGCGC TCTATCTCGC CAGCGACGAA TCGTCGTTCG TCGTCGGCAC CGAGCTGGTG
GTCGATGGCG GGGCGTCGCA GCTCTGA
 
Protein sequence
MRLRNKSALI TGGTSGIGLA TAKLFISEGA RVAVTGRDER VFERVKAELG EHAVVLKGDV 
RSLDDMRAIA GEVNERFGGL DVVFANAGWA FPSAVNDIDD TLYNDIMDVN VKGVVFTLQA
ALPYLREGSS VILNTSFVAQ TGKHGISLTA AAKAAVRSLA RSWSYEFLDR KIRFNAIAPG
AIDTPLLSKW GKPDEWVRDR KAEFAEAIPV GRMGHADDIA YAALYLASDE SSFVVGTELV
VDGGASQL