Gene Bcen2424_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3626 
Symbol 
ID4451753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp472899 
End bp474005 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content72% 
IMG OID639695685 
ProductNAD/NADP octopine/nopaline dehydrogenase 
Protein accessionYP_837258 
Protein GI116691725 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.194438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAT GTGTTCTGGG CGGCGGCCAC GGCTGCCATG CGGCGGCCAT CGACCTGCTC 
GAAAAAGGCC ACGACGTGAC GTGGTGGCGG CGCGATCGCG AGCCGCATGC GCGGCTGCGC
GCGCTTGGCG TACTGAACGT CACCGACTAT CGCGGCAAGC GCGCGGTGCC GCTCGGCGAC
GCGCCGGGCG CGATCCGCCT GACCGACGAT CTGGCCGCCG CGCTGCGCGG CGCGCGGCTC
GTCGTGGTGC CGCTGCCGGC CACGTCGCAC GACGCGCTCG CCGCGCAGGT CGCGCCGCTG
CTGGAGGATG GCCAGGTCGT GTTCCTGCCG CCCGGCACGT TCGGCAGCGT CGTGTTTGCC
CGCGCGGCCG CCGACGCCGG CAACCGTGCG CGCGTCGCGT TCGCCGAAAC CGGCACGCTG
CCGTACCTGG TGCGCAAGCA TGGCGACAAC GAGGTCGTGA TCAGCGCGTA CGCGACGCGT
CTGCCGACCG GCGTGTGGCC GGCGAACGCG GCCGGCTGGG CGTTCGACGT GCTGCGCGCG
GGCTATCCGT CGGTCGAGCC GGTCGAGGAT GCGTTGTCCG GTGCACTGAT GAACGCGGGC
CCCGTGATCC ATCCGCCGCT GATCCTGATG AACGCCGGGC CGCTCGAACA CTTCGACGCG
TGGGACATCC ACAACGAAGG CACGCAGCCG TCGATCCGCC GCGTGACGAA CGCGCTCGAC
GCCGAACGCA TCGCGGTGCG CGAAGCGCTC GGCTACCGTG CGCCGCATTT CCCGCTCGCC
GATCACTACG CGACCGACGG CGACGAGTGG ATGTACGGGC GCGGCGCGCA CGGCAAGCTG
ACCGATAGCG GCGACTGGCG CGAGAAGATC GATCTGCGCA CGCATCGCTA CATGCTCGAG
GACACCCGGC TCGGGCTGTC GTTCATCGTG TCGTGCGGGC GCTGGGCCGG CGTGCCGACG
CCCGTCGCGC AGGGGCTGCT GAGCATCGCG AGCGCGGTCG CCGTGCGCGA CCTGTATGCG
GAAGGGCGCA CGCTGGAGCG GCTCGGGTTC GCGGCGCTGT CGAAGGATGC GCTGCGCGCG
CTGCTCGACG CGGGGTATTC GGCATGA
 
Protein sequence
MKVCVLGGGH GCHAAAIDLL EKGHDVTWWR RDREPHARLR ALGVLNVTDY RGKRAVPLGD 
APGAIRLTDD LAAALRGARL VVVPLPATSH DALAAQVAPL LEDGQVVFLP PGTFGSVVFA
RAAADAGNRA RVAFAETGTL PYLVRKHGDN EVVISAYATR LPTGVWPANA AGWAFDVLRA
GYPSVEPVED ALSGALMNAG PVIHPPLILM NAGPLEHFDA WDIHNEGTQP SIRRVTNALD
AERIAVREAL GYRAPHFPLA DHYATDGDEW MYGRGAHGKL TDSGDWREKI DLRTHRYMLE
DTRLGLSFIV SCGRWAGVPT PVAQGLLSIA SAVAVRDLYA EGRTLERLGF AALSKDALRA
LLDAGYSA