Gene Bcen2424_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3608 
Symbol 
ID4451704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp454209 
End bp455459 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content73% 
IMG OID639695667 
Productmajor facilitator transporter 
Protein accessionYP_837240 
Protein GI116691707 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAG TGCCGCAACC GGAGCGTGCC GGCCGCTCGC GGCCGGACGC CGGCGCAACC 
GATCCCGGCC GCATGGCCGC GTGGCGGCTC GCGATCTGCC TGTCGCTGGG CAGCGCGATC
GCGCTTGGCC TCGCCCGCTT TTCGTATGCG CTGCTGCTGC CGCCGATGAA GGCCGACCTC
GGCTGGACGT TCGCGCAGGC CGGCGCGCTG AACACGGCGA ACGCGGCCGG TTACCTGATC
GGTGCGCTGG CCTTTCCGTT GCTGTCGCGG CGCTGGCGCG CGGGCACGCT GCTCGCGGCC
GGCTGTGTGC TGACCGCCGT GCTGATGGCC GCGGGCGGGC TCACGTCGGA CATGCACGTG
CTGCTCGCGC AGCGGCTCGC AACGGGTGTC GGCAGCGCGC TGATCTTCAT CAGTGGCGGC
GTGCTGGCCG CGCGGCTCGC GTCCGCGTCG CCGCGCGACG CAGGGCTGCT GCTCGGCCTC
TATTACGGCG GCACCGGATG GGGCATCGTC GCGTCGTCGC TGCTCGTGCC GGCGACGCTC
GTGCACCGTG TACACGGCTG GCAGCCGGCA TGGTTCGCAC TCGCGACGGC GTGCGTGCTG
TTCTCGGCGG TGGCCGTGTC GGCTGCGCGC CGCATCGAGC ATGCGCATGC GGCACCGGCC
AGGGAGGCCG ACGGCGCGAA ACCGGCCGCG ACCGCGAGCC CGGCCCGCTT CGCACTCGCG
CTGGCCGGCT ACGGCCTGTT CGGCGTCGGC TATATCGGCT ACATGACGTT CATCGTCGCG
CTGCTGCGCG GCGCGGGGAT GAGCGGCACG GTGGTCGCCG CGTTCTACGT GATGCTCGGC
GTCGCGACCG TCGTGTCGGC GCGGTTGTGG TCGGGGCTGC TCGATCGGAT GCGCGGCGGC
CAGGCGCTCG CCGTGCTCAA CGCGCTGCTC GGCGTCGCGA CGCTGATGCC CGCGCTGTTC
GTGCATCCGG CTGCCGCGTT CGCATCGGGC TTGCTGTTCG GCGCGACGTT CCTGTCGGCG
GTGGCCTCCA CGACCGCCTT CGTGCGGCAC AACCTGCCGC CCGATGGTTG GGCGAAGGGC
ATCAGCGCAT TCACGACGGT CTTCGCCTTC GGGCAGATCG CGGGGCCGGT CGCGATCGGC
TGGGTGTCGG ACAGCGCGGG GCTCGCGCGC GGGCTCGTGT ATTCGGCGCT GACGCTGTTC
GCGGGCGCGG CACTTGCGGT CGGGCAGCGT GCGCTGCGGG CGCCTGCGTA G
 
Protein sequence
MRAVPQPERA GRSRPDAGAT DPGRMAAWRL AICLSLGSAI ALGLARFSYA LLLPPMKADL 
GWTFAQAGAL NTANAAGYLI GALAFPLLSR RWRAGTLLAA GCVLTAVLMA AGGLTSDMHV
LLAQRLATGV GSALIFISGG VLAARLASAS PRDAGLLLGL YYGGTGWGIV ASSLLVPATL
VHRVHGWQPA WFALATACVL FSAVAVSAAR RIEHAHAAPA READGAKPAA TASPARFALA
LAGYGLFGVG YIGYMTFIVA LLRGAGMSGT VVAAFYVMLG VATVVSARLW SGLLDRMRGG
QALAVLNALL GVATLMPALF VHPAAAFASG LLFGATFLSA VASTTAFVRH NLPPDGWAKG
ISAFTTVFAF GQIAGPVAIG WVSDSAGLAR GLVYSALTLF AGAALAVGQR ALRAPA