Gene Bcen2424_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3590 
Symbol 
ID4451601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp435705 
End bp436730 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content70% 
IMG OID639695649 
ProductABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 
Protein accessionYP_837222 
Protein GI116691689 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.102161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT CGCCGCGCCG CCGCGCGTTG ATCGCAGCCG GGCTCGGCGT GCTGGGCGGG 
CTCGGGGCGC CGGCGCTGGT GCGCGCGAAG CCGCGCACGG TGCGGATCTC CAAAGGCTAT
GGCGTGCTGT ACCTGCCGTT GCTCGTGATG GAGAAGCAGC GGCTCTTCGA GCGGCACGCG
GCGCGTCACG GCGTGCGCGA CGTCGCGGTC GAATGGGTGC TGCTCGACGG CGGCAATTCC
GTCAACGACG CGATGATGGC CGGCACGCTC GATTTCGCGG GCGCCGGCGC GCCGGGTTTC
ATCGAGCTGT GGGCGCGGGC GCGCGGCATT CCGAACGTCG AGGTGATCGG CATCAGCGGG
CTGTCGACCA CGTCGCTGTC GCTGAACGCG AACCGCGCGG GCCTCGCATC GCTGCGCGAC
TTCACGTCGT CCGACCGGAT CGCGGTGCCG GGCATCCGCA CGTCGCTGTC GGCGGTCGTG
CTGCAGATGG TCGCGAGCCG GCAGCTCGGC CCGACGCATT TCGCGCAGCT CGATTCGATC
ACCGTGAACC TGCCGCATCC GCAGGCGATG CAGGCGCTGA TCCGCCGCGA GAACGGCGTG
ACCGCGCACT TCACGTCGCC GCCGTTCTCG ACGCTCGAAT TGCGGCAGCC GGGCATTCAT
CGCGTGGTGA GCTCGGTCGA CGTGCTCGGC CCGATGACGC TCGACGTCGT GTTCGCGCCG
AAGCGGCTCG TCGATGCGGA GCCGGCGCTC GCCGTCGCGT TTCTCGGCGC GCTCGACGAA
GCGAACCGCC TGATCGCGCA GGACCCGCGT GCGGCGGCGG CGCTCTATGC GGCGTCGTCG
GGCGTCGGCG TGTCGCACGA CGACGTGATG CGGATGCTCG CCGCGCCCGA CACGCGCTTC
TCGGTGTTGC CGAACCAGCT GATGGACTAC GTCGAATTCC TGTACCTGGC CGGCACGATC
AAGGCGAAGC CGCGCGCGTG GCGCGAGATG TTCGCGCCGA TGCTCGACGA CTACCGGTCG
GGTTGA
 
Protein sequence
MTTSPRRRAL IAAGLGVLGG LGAPALVRAK PRTVRISKGY GVLYLPLLVM EKQRLFERHA 
ARHGVRDVAV EWVLLDGGNS VNDAMMAGTL DFAGAGAPGF IELWARARGI PNVEVIGISG
LSTTSLSLNA NRAGLASLRD FTSSDRIAVP GIRTSLSAVV LQMVASRQLG PTHFAQLDSI
TVNLPHPQAM QALIRRENGV TAHFTSPPFS TLELRQPGIH RVVSSVDVLG PMTLDVVFAP
KRLVDAEPAL AVAFLGALDE ANRLIAQDPR AAAALYAASS GVGVSHDDVM RMLAAPDTRF
SVLPNQLMDY VEFLYLAGTI KAKPRAWREM FAPMLDDYRS G