| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3577 |
|---|
| Symbol | |
|---|
| ID | 4451584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 422340 |
|---|
| End bp | 423419 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639695636 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_837209 |
|---|
| Protein GI | 116691676 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.427318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGCT TCCTCGACGT TCCCGCCACC GCCCGCCTGA TCGCCCAAAC CGGCGTCACG
ACGTTCCTGC GCGAACTGGT CGACACGCTG CGCGCCGACT ACCTGCACTG GGCCGATTTC
GACAAGTCGC CGCGCGTCGC GTGCCACTCG CGCGACGGCG TGATCGAGCT GATGCCTGTG
GCGAACGCGT CGTTGTTCGC GTTCAAGTAC GTGAACGGCC ACCCCGTCAA TGCGGCGCGC
GGCATGCACA CGGTGATGGC GTTCGGCGCG CTCGCCGAGG TCGATACCGG CTACCCGCTG
CTGCTCGCCG AACTCACGCT GACCACCGCG CTGCGCACGG CCGCCACGTC GGTCCTCGCC
GCGCAGGTGC TCGCGCGGCC CGATGCGCGC TCGATGGCGC TGATCGGCAA CGGCGCGCAA
AGTGAATTCC AGGCGATCGC ATTCCACACG CTGCTCGGCA TCGACGAAAT TCGCGTGTTC
GACGTCGATT CGCACGCGAC CGACAAGCTC GTGCGGAACC TTGCCGCGTA CCCCGGCTTG
CGCATCGTGC GCGCCGCTTC GACCGCCGAC GCGGTGCGCG GCGCCGACAT CGTGACGACC
GTCACCGCCG ACAAGGCGTT TGCCACGATC GTCACGGCCG ACATGATCGA GCCCGGCATG
CACCTGAACG CGGTCGGCGG CGACTGTCCG GGCAAGACCG AACTCGAAGC GGGCGTGCTG
CGCGCGGGCC GCGTGTTCGT CGAATTCGAG CCGCAGTCGC GCATCGAGGG CGAGATCCAG
CAGATGCCGG CCGATTTCCC CGTCACCGAG CTGTGGCGCG TGCTGCAGCG CGAGACGACC
GGCCGCCAAC GCGCGGATGA AGTCACGGTG TTCGACTCGG TCGGCTTCGC GCTCGAGGAT
TACTCGGCGC TGCGCTACCT GTACGCGCTC GCGCAGCAGC ACAACGCGGG CGTCGAGATC
GCATTGATTC CGCCTGCCGT CGATCCGAAG AACCTGTTCG CGCTGATCGA CGACCCGGCC
GCGATCGCGC ACGGCCACGC GGCGTTCGTG ACCGAAGCCG TCGCCGCGTT CGCGCGCTGA
|
|---|
| Protein sequence | MTRFLDVPAT ARLIAQTGVT TFLRELVDTL RADYLHWADF DKSPRVACHS RDGVIELMPV
ANASLFAFKY VNGHPVNAAR GMHTVMAFGA LAEVDTGYPL LLAELTLTTA LRTAATSVLA
AQVLARPDAR SMALIGNGAQ SEFQAIAFHT LLGIDEIRVF DVDSHATDKL VRNLAAYPGL
RIVRAASTAD AVRGADIVTT VTADKAFATI VTADMIEPGM HLNAVGGDCP GKTELEAGVL
RAGRVFVEFE PQSRIEGEIQ QMPADFPVTE LWRVLQRETT GRQRADEVTV FDSVGFALED
YSALRYLYAL AQQHNAGVEI ALIPPAVDPK NLFALIDDPA AIAHGHAAFV TEAVAAFAR
|
|---|
| |