Gene Bcen2424_3569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3569 
Symbol 
ID4451683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp411918 
End bp413045 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content70% 
IMG OID639695628 
Productalanine racemase domain-containing protein 
Protein accessionYP_837201 
Protein GI116691668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.463825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTTC ACACCCTCAA CACCCCCGCC GCATTGATCG ATATCGACCG CATGCAGCGC 
AACATCGCCC GCATGCAGAC GCATCTGGAC GCGCTCGGCG TGCGGTTCCG GCCGCATGTG
AAGACCACCA AATGCCGGCA CGTCGTCGAC GCGCAGATCG CGGCGGGCGC GCAGGGCATC
ACGGTGTCGA CGCTCAAGGA AGCCGAGCAG TTCTTCGCGC ACGGCATCCG CGACATCGTC
TACGCGGTCG GCATGGTGCC CGCCAAGCTC GGCCAGGCGC TTGCGCTGCG CCGCCAAGGC
TGCGACCTGA AGATCGTCGC CGACAGCCTG CCGGCCGCGC ACGCGATCGC CGCGTTCGGG
CGCGAGCACG GCGAACGTTT CGACGTGTGG ATCGAGGTCG ACGTCGACGG CCACCGCTCG
GGCATCCCGC CCGACGCCGA CCTGCTGATC GACGTCGGCC GCGCGCTGAC CGACGGCGGC
ATGCTGCTCG GCGGCGTGCT CGCTCACGCG GGCTCCAGCT ACGAATACGA CGCGCCCGAG
GCGCTGGCCG CGATCGCCGA ACAGGAGCGC AGCCGCACCG TGCGGGCCGC GGAGCGCCTG
AGAACCGCCG GCTTGCCGTG CCCGGTCGTG AGCATCGGGT CGACGCCCAC CGCGCTCGCG
GCGGAACGGC TCGACGGCGT GACCGAAGTG CGCGCCGGCG TGTACGTGAT GTTCGACCTC
GTGATGCACA ACGTCGGCGT GTGCGAACTG TCCGACATCG CGCTGTCGGT GCTGACCACC
GTCATCGGTC ATCAGGAAGA GAAAGGCTGG GCGATCGTCG ACGCGGGCTG GATGGCGATG
AGCCGCGACC GCGGCACGCA ACGCCAGGCG CGCGATTTCG GCTACGGGCA GGTCTGTACC
GAAGCCGGCG ACGTGCTCGG CGACTACCTG CTGAGCGCCG CCAACCAGGA GCACGGGATC
GTGTCGCGGG CGGGCACGCC GGATACGGGC ATCGCGCAGC GGTTCCCGAT CGGCACGCGG
CTGCGCATCC TGCCGAATCA CGCGTGCGCC ACCGGCGCGC AACATCCCGA CTACCAGGCG
GGCGACGACG GCGCCGCGCA GACGTGGCCG CGCTTCTACG GGTGGTAA
 
Protein sequence
MDLHTLNTPA ALIDIDRMQR NIARMQTHLD ALGVRFRPHV KTTKCRHVVD AQIAAGAQGI 
TVSTLKEAEQ FFAHGIRDIV YAVGMVPAKL GQALALRRQG CDLKIVADSL PAAHAIAAFG
REHGERFDVW IEVDVDGHRS GIPPDADLLI DVGRALTDGG MLLGGVLAHA GSSYEYDAPE
ALAAIAEQER SRTVRAAERL RTAGLPCPVV SIGSTPTALA AERLDGVTEV RAGVYVMFDL
VMHNVGVCEL SDIALSVLTT VIGHQEEKGW AIVDAGWMAM SRDRGTQRQA RDFGYGQVCT
EAGDVLGDYL LSAANQEHGI VSRAGTPDTG IAQRFPIGTR LRILPNHACA TGAQHPDYQA
GDDGAAQTWP RFYGW