Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3538 |
Symbol | |
ID | 4452807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 376333 |
End bp | 378648 |
Gene Length | 2316 bp |
Protein Length | 771 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639695597 |
Product | TonB-dependent receptor |
Protein accession | YP_837170 |
Protein GI | 116691637 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.25784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.393051 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGGA AAAAACTAAT CGTCACCGCG CTGGGGGGAC TGCTGACGGG CGGCGTCGTA TCGTCGCCCG CATGGGCGGA AGATGGCGCG GCGACGGCGG GGGCGCCGGA CGCGAAGCCG GCGCAACAGG CATCGGACGA TGCGGCCGCG GCCGCACCGA AGGCGGTGCG TGCGGACCGC GGTACGGCCG TACGCGAAAC GAACCTCGGC ACGGTGACCG TGACGGCGCG CCGGCGCAAG GAGCGCATCC AGGACGTGCC GGTCGCGGTC AGCGCGCTGA GCGGCGATGC GATCAAGAAC AACGAGCTGC GCGTGATCAA CGACGTGACG AAGTACGTGC CGAACTTCAC CGGGCAATCG ACCGAGGGCC GCGAACGGCC GCGCTGGTTC CTGCGCGGCG TCGGCAGCAA CGATCCGTCG GACCTGTCGC TGAGCCCGAT CGGCGTGTAC TTCGACGACG TGTACATCAA CAGCGTGTTC GGGCAGGGCT TTCCGCTGTT CGACCTCGAC CACATCGAAG TGCTGCGCGG GCCGCAGGGC ACGCTGTGGG GCAAGAATAC GGTCGGCGGC GCGCTCAACA TCACGTCGCA GAAGCCGACG TTCGACGTGA GCGGCTACGG CAAGCTCGGC TTCGGCCAGT ACAACAGCCG GCTCGCGGAA GCGGCGATCG GCGGGCCGAT CGGCAAGAAC GACGTGCTGG CCGCGCGCGT GTCGGTGTAT CACGAGAATG CCGACAGCTT CTACACGAAC ACGGTGCAGC AGGGGCGCTT CGGCGGCTTC CACGACAACG CGGTGCGCTT CCAGGTGCTC GCCGTGCCGA CGTCGGACAC CGATTTCCTG TTCAACATCC ATGGCCGCAA CTACACGGGC GGCGGCAACG CATGGCACGC GGAAGGCGCG GGGCGCGGCG GCACGAACCA GTTCGGCTTC GTCGGGTCGA GCGATCCGTA TACGGTGTCG CTCAATGCGC CGTCGAGCGA TCACATCTCG ACGTGGGGCA CGTCGCTGAC CGCGCACTGG CGCATCAACC CGGCGGTGTC GCTGACGTCG ATCACCGCGT TCGAAGGGCT GCACCGCTGG TACCAGGACG ACGAGGACTA TTCGCCGTTC GATGCGGCGC GCTCGCACGA CCGCCTGTCG AGCCGGCAGT TTTCGCAGGA ATTCCGGCTC GAATCGCCGC AGAGCGACCG CCTGAGCTGG ATCGTCGGCA CGCATCTGTT TACCGAGCAA CTGGCCGAGC AGGGCGCCGG CGGCGGGCTG CCGGGCTCGC CGTCGCCCGC GTACTACCAC CTGACGGATC TCACGCAGCA CACGCAGAGC GCGGCGATCT TCGGCAGCGT CAAGTACCGG TTCACCGACC GCTTCAACGT GACGGGCGGG CTGCGTTACA CGATCGAGCG CAAGACCATC AACCTGACCG GGCTGCAGGA TACCGGCAAC GTGACGTTCA GCGATCCGAA CAGCTGGTGG TCGCCGTCGT CGGTGTCGTC GCCGCTCGCG GTCAGCGCGC GGCAGAACCA GACCAACACC TGGCGCGCGC CGACCTGGGA CCTCACGCCC GAATATGCGC TCAGCAGCAA CGTGCGCGCG TATTTCCGCT ATGCGCGCGG CTTCCGCTCG GGCGGCTACA ACGGCAACGC CTATACGCAG AGCACGGTGT CGACCGTGTC GCCGGAGTAC CTGACCGATT ACGAGGTCGG CATCAAGAGC GAATGGTTCG ACAAGCGGCT GATCGTCAAC GCGAGCGTGT TCCACTACGA CTATCGCGAC ATCCAGGTGT TCGCGCTGGC GCCGAACCCG TTCGGCGGGC CGCCGGTGTC GACGCTGTCG AATGCGGGGC AGGGGCGCGC GGACGGCTTC GAGCTGGAGC TGAAGGCGCA GCCGGTCAAC AGCCTGTACC TGTTCGCGAA CCTCGGGATG CTGAACACGC GCTACACGGA ATTCCGCAAC GTGCCGACGG CCGTGGGCAA CTCGTTCGCA CGTTCGCCGC ATACGACGCT GAACGCGGGC TTCGACTATC GCGTACCGGT GTCGTTCGGC ACGCTGACGG CGGGCGGCGA CGTGAACTAC CGCAGCCGCG AGTACTTCAG CGCGACGCGG CAGACGATGC CGCAGCTGTG GCAGGGCGGC TATACGGTGC TGAACGCGCA TGTGTCGTAC ACGACGCCGA ACCAGAAGTA CATCGTGACC GGCTACGTGA CGAACCTGAC GAACAAGGTC TACAAGAAGC TCGAGCTGTT GCCGTCGTAT GGCGCGTATC CGACGCTGTA CGGCGATCCG CGCACGGTCG GGATCACGCT GACCGCGAAG ATCTGA
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Protein sequence | MFRKKLIVTA LGGLLTGGVV SSPAWAEDGA ATAGAPDAKP AQQASDDAAA AAPKAVRADR GTAVRETNLG TVTVTARRRK ERIQDVPVAV SALSGDAIKN NELRVINDVT KYVPNFTGQS TEGRERPRWF LRGVGSNDPS DLSLSPIGVY FDDVYINSVF GQGFPLFDLD HIEVLRGPQG TLWGKNTVGG ALNITSQKPT FDVSGYGKLG FGQYNSRLAE AAIGGPIGKN DVLAARVSVY HENADSFYTN TVQQGRFGGF HDNAVRFQVL AVPTSDTDFL FNIHGRNYTG GGNAWHAEGA GRGGTNQFGF VGSSDPYTVS LNAPSSDHIS TWGTSLTAHW RINPAVSLTS ITAFEGLHRW YQDDEDYSPF DAARSHDRLS SRQFSQEFRL ESPQSDRLSW IVGTHLFTEQ LAEQGAGGGL PGSPSPAYYH LTDLTQHTQS AAIFGSVKYR FTDRFNVTGG LRYTIERKTI NLTGLQDTGN VTFSDPNSWW SPSSVSSPLA VSARQNQTNT WRAPTWDLTP EYALSSNVRA YFRYARGFRS GGYNGNAYTQ STVSTVSPEY LTDYEVGIKS EWFDKRLIVN ASVFHYDYRD IQVFALAPNP FGGPPVSTLS NAGQGRADGF ELELKAQPVN SLYLFANLGM LNTRYTEFRN VPTAVGNSFA RSPHTTLNAG FDYRVPVSFG TLTAGGDVNY RSREYFSATR QTMPQLWQGG YTVLNAHVSY TTPNQKYIVT GYVTNLTNKV YKKLELLPSY GAYPTLYGDP RTVGITLTAK I
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