Gene Bcen2424_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3529 
Symbol 
ID4452201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp366895 
End bp368001 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content69% 
IMG OID639695588 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_837161 
Protein GI116691628 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.151359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.94534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA CACTCTCCCT CGCGTCGCTG CATCGCCCGC TGCGCGCGCT GCTCGCCGCG 
CTGCCATTGG CCGTCGCATC ATTCGTCACG CCCGCCGCCC ACGCGCAAGA CGCGCCCAAG
GTCGTGCGAA TCGCCGTCGT CGCGTATTCG AGCGGCGGCA AGACGCAATA CGCGGGCGCA
TCCGCGCTGA TCGACGCCGA CAAGTCGCTC GAAAAAGCGC TCGCCGCGCG ACACGTGACG
CTGCAATGGG TGCCGGTGTC GACCGCCGCG GTCGGCACGC TCGTCAACGA GGCATTCACG
AACGGCAGCA TCGATTTCGC CGGCTACGGC GACCTGCCGT CGGTGGTCGT CAACGCGTCG
GGCACGCACA CGCGCCTGAT CGTGCCGGGC GGCGTCGGCA GCAACACGTA TCTGGTCGTG
CCGGCCGGCT CGAGCGCGAA GTCGATCGTC GACCTCAAGG GCAAGCGCAT CGCCCTCAAT
CGCGGCCGGC CGTGGGAAGT GCCGTTCAGC AAGCTGCTCG CCGAGAACGG GCTGAAGCTG
TCCGACTTCA GGATCTATAA CCTCGATCCG CAGGCCGGCG CGGCGGCCGT CGCGGCCGGC
CGCGTCGACG GCTTCTTCAC GCTGTCCGAC GCGTATTCGC TCGTCGACAA GAACGTCGGC
AAGATCATCT GGTCGACCAA GAACGCGCCC GACGACTGGA AGATGCGCGC GGAACTGTGG
GCGTCCGACG ATTTCGTGCG GCGCTACCCC GACATCACGC AGATCGTCGC GACGGCCTAC
GTCCGGGCCG CGCACTGGAT CTCGCAGCCG CAGAACCGCG ACGCGTACGT GAAGATCCTG
AGCGCGTCCG GCCAGCCGGA AAGCGTCGTG CGCCGCGAAT ACGCGGACGA AGCGACGCCG
TGGAAGGAGC AATGGACGCC GCTCTTCACG CCGGCGTTGA CCGGCCATTA CCGCGATGTC
GTCGCGTACA GCCGCCAGGC CGGGCTGACG TCCGCTCCGG TCGACGTGAA CGCGCTGCTC
GCGCCGACCT TCGTGTCGAC CGCGCTCAAG CAGCTCGGCC TCGACGGCTA CTGGCGCGCC
GACGCCCCGC GCGTCGCGAG CCGCTGA
 
Protein sequence
MKPTLSLASL HRPLRALLAA LPLAVASFVT PAAHAQDAPK VVRIAVVAYS SGGKTQYAGA 
SALIDADKSL EKALAARHVT LQWVPVSTAA VGTLVNEAFT NGSIDFAGYG DLPSVVVNAS
GTHTRLIVPG GVGSNTYLVV PAGSSAKSIV DLKGKRIALN RGRPWEVPFS KLLAENGLKL
SDFRIYNLDP QAGAAAVAAG RVDGFFTLSD AYSLVDKNVG KIIWSTKNAP DDWKMRAELW
ASDDFVRRYP DITQIVATAY VRAAHWISQP QNRDAYVKIL SASGQPESVV RREYADEATP
WKEQWTPLFT PALTGHYRDV VAYSRQAGLT SAPVDVNALL APTFVSTALK QLGLDGYWRA
DAPRVASR