| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3517 |
|---|
| Symbol | |
|---|
| ID | 4453379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 354826 |
|---|
| End bp | 356778 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695576 |
|---|
| Product | SufS subfamily cysteine desulfurase |
|---|
| Protein accession | YP_837149 |
|---|
| Protein GI | 116691616 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCATG CGCCGCTGCC GGCCGGCTTG CCCGACCCGG CGACGCTCGC GCGGCTCGCG
TCCGAGTTCT TCGCGACGCC GCCCGGGCAG GCCACCGCGC CCGGGTTGTC GGCGGGCAGC
GGCGCGGTCG GCGGCGTGCC GTCGGCCTTG CCCGCGGCGG CGCCGATTCT CGCGTCGGTG
AGCAACCCGG TGCCGGGCGG TTCGCCGCTC GCGGGCCCGG GCGGGGCGGG CACCGGCGTA
CCGGGGCTCG CGCTGCCGCA AGGCAAGGTA CCGGGCGCGA ACCTCGCGCC GTCCGCGCCG
ACGCACGTGC TGTCGCTCGG CAACCGCGCA CCCGCGCTCG CGCCGCATGC GGCCGCGCAG
AACGGGTTGC CCGACAACGT CGTATCGATC GCGCCCGCGC TGGAGCCGCG CGTCGGCGGC
GCGGCGCTCG GCGTGCCGCA GGTGAATGCG CCGGCGCCGG AAGGCGCGGC GAAGGCGTCG
CCGTACTACT TCACCGACGG TTCGCTGCAG GGCTGGCAGG GGACGCCGCA GGACATCGTC
GTGCCGTCGA ACGGCCTCGC GTCGCCGGAA GCGTTCGGGT TGCCGGGCGA CGACGCGCTG
CGCGCGCTGC TCGCCGTGCA GCGCGACGTG CGGGTGTCGC ATGCATCGGG CGCATCGGGC
GCCGACGTGC CGCGTTATTT CATCGACGAC TCGCACGCAG CCGAGCCGCA AGGCCAGCTG
TATCGCGGCG CTCATCCGCC GTTCGACGTG AACGCGATCC GCCGGGATTT CCCGATCCTG
CAGGAGCGCG TGAACGGCAA GCAGCTCGTC TGGTTCGACA ACGCGGCGAC GACGCACAAG
CCGCAGGCCG TGATCGACCG CCTCGCGTAC TTCTATGCAC ACGAGAACTC GAACATCCAC
CGCGCGGCGC ACGCACTGGC CGGCCGCGCG ACGGATGCGT ACGAGCATGC ACGGGAAACG
GTGCAGCGCT TCATCGGCGC ATCGTCGCCC GACGAGATCG TGTTCGTGCG CGGCACGACC
GAGGCGATCA ACCTGATCGC GAAGACGTGG GGCGTGCAGA ACGTCGGCGA AGGCGACGAG
ATCGTCGTGT CGCATCTCGA GCATCACGCG AACATCGTGC CGTGGCAGCA GCTTGCCGCG
CTCAAGGGCG CGAAGCTGCG CGTGATTCCG GTCGACGATT CGGGGCAGGT ACTGCTCGAC
GAATACCGGA AGCTGCTCAA CGATCGCACG AAGATCGTGT CGGTCACGCA GGTGTCGAAC
GCGCTCGGCA CGGTCGTGCC GGTGAAGGAG ATCGTCGAGC TTGCGCATCG CGCGGGCGCG
AAGGTGCTGG TCGACGGTGC GCAGTCGATC TCGCACATGC GTGTCGACGT GCAGGCGCTC
GATGCGGATT TCTTCGTGTT CTCCGGGCAC AAGATCTACG GGCCGACCGG GATCGGCGTG
GTGTACGGCA AGCGCGCGAT CCTCGACGAC ATGCCGCCGT GGCAGGGTGG CGGCAACATG
ATCGCGGACG TGACGTTCGA GCGCACGGTG TTCCAGCCGC CGCCGAACCG TTTCGAAGCC
GGCACCGGCA ACATCGCGGA TGCGGTGGGG CTCGGCGCGG CGCTCGACTA CGTGAACCGT
GTCGGCATCG AGAACATCGC GCGCTACGAG CACGATCTGC TCGCGTATGC GACGAGCGTG
CTCGCGCCGG TGCCGGGCGT GCGGCTCGTC GGTACCGCGC GCGACAAGGC GAGCGTGCTG
TCGTTCGTGC TGAAGGGCTA TGAAACCGAG GAAGTCGGGC AGGCGCTGAA CGAAGAGGGC
ATCGCGGTGC GCTCGGGGCA TCACTGCGCG CAGCCGATCT TGCGGCGGTT CGGGCTCGAA
GCCACGGTGC GGCCGTCGCT CGCGTTCTAC AACACGTGCG ATGAAGTCGA TGCGCTGGTG
AGTGTCGTCA GGAGACTGGC GGCGCGGCGC TGA
|
|---|
| Protein sequence | MPHAPLPAGL PDPATLARLA SEFFATPPGQ ATAPGLSAGS GAVGGVPSAL PAAAPILASV
SNPVPGGSPL AGPGGAGTGV PGLALPQGKV PGANLAPSAP THVLSLGNRA PALAPHAAAQ
NGLPDNVVSI APALEPRVGG AALGVPQVNA PAPEGAAKAS PYYFTDGSLQ GWQGTPQDIV
VPSNGLASPE AFGLPGDDAL RALLAVQRDV RVSHASGASG ADVPRYFIDD SHAAEPQGQL
YRGAHPPFDV NAIRRDFPIL QERVNGKQLV WFDNAATTHK PQAVIDRLAY FYAHENSNIH
RAAHALAGRA TDAYEHARET VQRFIGASSP DEIVFVRGTT EAINLIAKTW GVQNVGEGDE
IVVSHLEHHA NIVPWQQLAA LKGAKLRVIP VDDSGQVLLD EYRKLLNDRT KIVSVTQVSN
ALGTVVPVKE IVELAHRAGA KVLVDGAQSI SHMRVDVQAL DADFFVFSGH KIYGPTGIGV
VYGKRAILDD MPPWQGGGNM IADVTFERTV FQPPPNRFEA GTGNIADAVG LGAALDYVNR
VGIENIARYE HDLLAYATSV LAPVPGVRLV GTARDKASVL SFVLKGYETE EVGQALNEEG
IAVRSGHHCA QPILRRFGLE ATVRPSLAFY NTCDEVDALV SVVRRLAARR
|
|---|
| |