| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3503 |
|---|
| Symbol | |
|---|
| ID | 4453365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 340743 |
|---|
| End bp | 342020 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639695562 |
|---|
| Product | epocide hydrolase domain-containing protein |
|---|
| Protein accession | YP_837135 |
|---|
| Protein GI | 116691602 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.716412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCA CACCGTTTTC CCCGATGCGT CGCCACCTGC TGGCCACTTC CGTGGCCGCC
GGGGTGTCGG CGATGCTGCC CACCGCGCTG CATGCGGCCA CCGGCGCGAG CGGCATACGC
CCGTTCACCG CACACATTCC CGATGAAGCC GTGGCCGACC TGCGCCGTCG CATTGCCGCG
ACGCGCTGGC CGGGCCGTGA GACCGTCGCC GACGAATCGC AGGGCGTGCG GCTCGCGCGC
ATGCAGGCGC TGCTGCGCTA CTGGGGCACC GACTACGACT GGCGCAAGGG CGAGGCGCGC
CTGAACGGTT TCCCGATGTT CATCACGGAA ATCGACGGGC TCGACATTCA TTTCATTCAC
GTGCGGTCGC GGCACGAGAA CGCGATGCCG ATGATCATGA CGCACGGCTG GCCCGGTTCG
ATCTTCGAGC TGCTGAAGGC GATCGGTCCG CTGACCGACC CGACCGCGCA CGGCGCGAGC
GCGGACGATG CGTTCCACGT CGTCGTGCCG TCGCTGCCGG GCTTCGGCTT CTCGGGCCGG
CCAACGAAGA CCGGCTGGGG CTCCGACCAC ATCGCGCGAG CGTGGGGCGA GCTGATGGCG
CGGCTCGGCT ATACGCGTTT CGTGTCGCAG GGCGGCGACT GCGGCTCGGT GATCTCGCAC
CGGATGGCGA TGCAGCACGT GCAAGGTCTG GCCGGCATTC ACGTGAACAT GCCGGCGACG
GTGCCGCCGG AGATCGCGAC GCTGCTCGCG ACCGATGCGC CCGCGCCGGC GTCGCTGTCG
CCGAAGGAGA AGGCCGCGTA CGAGAAGCTC GCGACGTTCT ATCGCGACAA CTGCGGCTAC
TCGGCGATGA TGGTCACGCG GCCGCAGACG GTCGGTTATG CGCTGGCGGA TTCGCCGTCC
GGGCAGGCTG CGTGGATGTA CGACAAGATT TCGCAATGGA CTTATAGCGG AGGAGTACCG
GAACGCTCGA TTCCGCGCGA CGAGATCCTC GACGACATTT CGTTGTACTG GCTGACGAAC
ACCGCGACGT CGGCTGCGCA GATCTACTGG GAGGATCACT CGAACAACTT CAACGCGGTG
GATATCTCGT TGCCGGCGGC GATCACGGTG TTTCCGGGCG AGATTTATCA GGCGCCACGC
AGTTGGGCCG AGCGGAGTTA TCACAACCTG ATCTACTTCA ACGAAGTCGA CAAGGGCGGG
CACTTCGCGG CATGGGAAGA GCCTGAACTG TTTGCGCGTG AAGTGCGTGC CGGGTTCCGG
TCGTTGCGGC GCGTGTAA
|
|---|
| Protein sequence | MSSTPFSPMR RHLLATSVAA GVSAMLPTAL HAATGASGIR PFTAHIPDEA VADLRRRIAA
TRWPGRETVA DESQGVRLAR MQALLRYWGT DYDWRKGEAR LNGFPMFITE IDGLDIHFIH
VRSRHENAMP MIMTHGWPGS IFELLKAIGP LTDPTAHGAS ADDAFHVVVP SLPGFGFSGR
PTKTGWGSDH IARAWGELMA RLGYTRFVSQ GGDCGSVISH RMAMQHVQGL AGIHVNMPAT
VPPEIATLLA TDAPAPASLS PKEKAAYEKL ATFYRDNCGY SAMMVTRPQT VGYALADSPS
GQAAWMYDKI SQWTYSGGVP ERSIPRDEIL DDISLYWLTN TATSAAQIYW EDHSNNFNAV
DISLPAAITV FPGEIYQAPR SWAERSYHNL IYFNEVDKGG HFAAWEEPEL FAREVRAGFR
SLRRV
|
|---|
| |