Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3501 |
Symbol | |
ID | 4451702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 338810 |
End bp | 339700 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639695560 |
Product | LysR family transcriptional regulator |
Protein accession | YP_837133 |
Protein GI | 116691600 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.828341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.395337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCAC GCCCTTCCCG CCTGCCGCCG CTGAATGCGC TTCGCGCGTT CGAAGTGTCC GCGCGGCACC TCAATTTCCG CGCCGCCGCC GACGAGATCG GCGTCACGCA GGGCGCCGTC GCGCAGCAGG TGCGCCACCT CGAGGACGTG CTCGGCCTGA AGCTGTTCGA ACGCCTGCCG CGCGGCCTCG CGCTCACGCA TGACGGCGCC GCGTATTTCT CCGACGTGCA GCGCGCGCTG CATGCGATCG CCGACGCCAC CGACAAGCTC GTCAAGCGGC GCGCGGCGCT GACGATCAGC ACGACGCCGT CGTTCGCGTC GAAGTGGCTG ATCCCGCGGC TCGCGCAGTT CACCGAAGCA CACCCCGACT ACGACGTGCG CGTGATCGCC GATCCGCAGA TCGCGACGTT CCGCCACGAT GGCGTCGATC TCGCGATCCG CTACGGCAAG CCGCCGTTCG GCAAGCATCT CGCCACCCAT GCGCTGTTCC CGCTCGACGT GTGCGCGGTG TGCAGCCCGT CGGTGCTGAG CCCGCCGGCT GCGCCACGCG CGCTCGCCGG GCAGGTGCTG CTGCACGATG CGCATGACCT GTGGCCCGAA TTCCTCGCGG CAATGCCAGC ACCGGTCGAC GTCGATCCGC ACAAGGGGCT GCGCTTCAAC CAGACGTCGC TCGCGATCGA TGCGGCCGTT GCCGGCCAGG GCATCGCGCT CGCGACCGAG CCGCTCGTCG AGCGCGACAT CGCCGCCGGA CGGCTGTGCA AGCCGTTCGA CTTCGCGTTT CCGCTGTCAA TGGGGTTCTA TCTCGTGTAT CCGGCCGAGC GCCGCGACGA CGATGCGATC GCGGTGATGC GCGAGTGGAT GATCCAGGCC GCGTCGGACG GGCGGCCTTG A
|
Protein sequence | MPPRPSRLPP LNALRAFEVS ARHLNFRAAA DEIGVTQGAV AQQVRHLEDV LGLKLFERLP RGLALTHDGA AYFSDVQRAL HAIADATDKL VKRRAALTIS TTPSFASKWL IPRLAQFTEA HPDYDVRVIA DPQIATFRHD GVDLAIRYGK PPFGKHLATH ALFPLDVCAV CSPSVLSPPA APRALAGQVL LHDAHDLWPE FLAAMPAPVD VDPHKGLRFN QTSLAIDAAV AGQGIALATE PLVERDIAAG RLCKPFDFAF PLSMGFYLVY PAERRDDDAI AVMREWMIQA ASDGRP
|
| |