Gene Bcen2424_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3498 
Symbol 
ID4451699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp336687 
End bp337886 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content69% 
IMG OID639695557 
Productaminotransferase, class I and II 
Protein accessionYP_837130 
Protein GI116691597 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.117223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGT TCACGCCCTC ATTCCAAAAC CCTGCCGGCT CGCCGATCCG CGAGTTGTTC 
AAGTACCTGT CCGAACCGGG CATGATTTCC TTCGCGGGCG GCTATCCGGC GAGCGACCTG
TTCGACGTCG ACGGCCTGAA CGCGGCCGCC GAACGCGCGT ACGCACAGCC CGTCCGCTGC
CTGCAATACG GCCCGACCGA CGGCCTCGCC GAACTGAAGC AGCAACTGAT CGCGCTGATG
GCGCGTCGCG GCGTCGCCTG CGCGCCCGCC GAACTGCTCG TCACGACCGG TTCGCAGCAG
GGCCTCGACC TGCTGCTGCG CGTGATGGTG TCGCCCGGCG ACGTCGTGCT GACCGAACAG
CCGGCATACC CGGCCACGCT GCAGGCGATG CGGTTGCAAC AGGCGCGCAT CGTGACGATT
CCCGTCGACG GCGAAGGCCT CGACGTCGAT CGCCTCGCAG CGCAACTCGC GTCCGGCGCG
ATCGCGCAGC CGAAGCTGCT CTACACGGTT CCGACCTTCG CGAACCCCAC GGGCGCGACG
CTCACGCGCG AACGCCGGCT GAAGCTGCTG CGTCTCGCGG TGCAATACCG TTTCCTGATC
GTCGAGGACG ATCCGTACGG CGACCTGCGT TTCGCGGGCG AAGCCGTGCC GTCGATGCTC
GCGCTGGCCG GTGAAGTGGA CGGCGCGCGC GACTGGCTCG TGCATTTCGC GAGCCTGTCG
AAGATCGTCG CGCCGGGGCT GCGCGTGGGC TGGACGATCG CGCCGGCCGA GATCACGCGG
CGCTGCGTGA TCGCGAAGCA GACGGTCGAT CTGTGCAGCA CGCCGTGGAC GCAGGCCACC
GCCGCCGAAT ATCTGGCCGA CGGCGCGCTC GAACGTCATC TGCCGCGCAT CACGGCCGCG
TACCGGCGTA AGTGCGACGC GATGTGCGAC GCGCTGCGCG ACGGCTTCGG CGATGCGATC
GAATTCCATC GTCCCGAAGG CGGGATGTTC GTGTGGGCGC GGCTCGGCGC GGTATCGTCG
GATGTGCTGC TGCAACAGGC GATCGCGAAC AAGATCGTGT TCGTCCCCGG CAAGGCGTTC
TTCGCGGACA ACGTCGACGC GGCGTCGCTG CGCCTGTCGT TCGCCGCGCC GGACATCGAT
GCGATCCGGG AAGGCGTCGC GCGCCTCGTG CGCGCATATG GTGCGGCGCT GGCCGCGTGA
 
Protein sequence
MYAFTPSFQN PAGSPIRELF KYLSEPGMIS FAGGYPASDL FDVDGLNAAA ERAYAQPVRC 
LQYGPTDGLA ELKQQLIALM ARRGVACAPA ELLVTTGSQQ GLDLLLRVMV SPGDVVLTEQ
PAYPATLQAM RLQQARIVTI PVDGEGLDVD RLAAQLASGA IAQPKLLYTV PTFANPTGAT
LTRERRLKLL RLAVQYRFLI VEDDPYGDLR FAGEAVPSML ALAGEVDGAR DWLVHFASLS
KIVAPGLRVG WTIAPAEITR RCVIAKQTVD LCSTPWTQAT AAEYLADGAL ERHLPRITAA
YRRKCDAMCD ALRDGFGDAI EFHRPEGGMF VWARLGAVSS DVLLQQAIAN KIVFVPGKAF
FADNVDAASL RLSFAAPDID AIREGVARLV RAYGAALAA