| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3474 |
|---|
| Symbol | |
|---|
| ID | 4451623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 306385 |
|---|
| End bp | 307536 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639695533 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_837106 |
|---|
| Protein GI | 116691573 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCC GCATTCGTTC GCTTTCCGGC GTCGCACTGA CCGCCGCGCT TCTCGCGTTC
CAGACGGGCG CGGCCCATGC GCAGGAGACG ATCGTCAAGG TCGGCGTGGC CGGCCCGCTG
ACGGGCGGCG GCGCCGCTTA CGGGAAAGAC ATCGAGAACG GCGTGCGCAT GGCGGTCGAC
GAAGCGAATG CCGCTCGCAC GATGGTCGGC GGCAAGCCGG TGAAATTCGT CATCGCGTCG
CAGGACGACC AGAGTGATCC GCGCACCGGC GTGCAGGCCG CGCAGCAACT CGCCGACGCA
CAGGTGGCCG TCGTGATCGG CCACTTCAAT TCGGGCACGA CGCTGCCCGC GTCGAAGATC
TACGCGAAGG CCGGCATTCC GATGATCACG CCGTCGGCGA CCAATCCCGA CATCACGCGC
GCCGGGCTCG GCACCGTGTA TCGCGTGATC GCGACCGATA CGCAAAACGC GGGCAACGCC
GGTGCGTACG CCGCGAGCGT GACGAAGGCG AAGCGCATCG CGATCATCGA CGATCGCACC
GCGTTCGGCC AGGGCGAAGC CGACGAATTC GAGAAGGCCG TGAAGGCGAA CGGCGGCACG
ATCGTCACGC GCGAATTCAC GAACGACAAG GCCGTCGACT TCAGCGCGCA GCTCACGAAG
ATCAAGAGCA CCAACGCCGA TCTCGTGTTC TTCGGCGGGC TCGACGCACA GGCCGCGATG
CTCGTGAAGC GCATGCGCCA GCTCGGCATC CGCGCGCAGT TCCTCGCGGG CGGCGGCGTG
ATGAACGCGA ACTTCATCAA GCTGGCCGGC AATGCGGCCG AAGGCGCGTC GGTGTGGGAA
TACGGGCAGC CGCTGTCGCG TCTCGCGAAG GGCAAGCTGT TCGAAACGAA ATTCAAGCAG
AAGTACGGCG TCGACATGCT CGCGTATGCG CCGTTCGCGT ACGACGCGAC GTGGATCGCG
ATCAACGCGA TGCAGAAGGC GAACTCGACG AAGCCGGCCG ATTTCAACGG CGCGCTGAAG
GGCACGCGCT ACGACGGCAT CACGGGCACC ATCGCGTTCA CGAACACGGG CGACCTGAAG
AACCCGAGCT CGACGCTGTA TGAAGTGAAG AACGCCGCGT GGCAGCCCGT CACGACCCAG
TCGGCGGACT GA
|
|---|
| Protein sequence | MTFRIRSLSG VALTAALLAF QTGAAHAQET IVKVGVAGPL TGGGAAYGKD IENGVRMAVD
EANAARTMVG GKPVKFVIAS QDDQSDPRTG VQAAQQLADA QVAVVIGHFN SGTTLPASKI
YAKAGIPMIT PSATNPDITR AGLGTVYRVI ATDTQNAGNA GAYAASVTKA KRIAIIDDRT
AFGQGEADEF EKAVKANGGT IVTREFTNDK AVDFSAQLTK IKSTNADLVF FGGLDAQAAM
LVKRMRQLGI RAQFLAGGGV MNANFIKLAG NAAEGASVWE YGQPLSRLAK GKLFETKFKQ
KYGVDMLAYA PFAYDATWIA INAMQKANST KPADFNGALK GTRYDGITGT IAFTNTGDLK
NPSSTLYEVK NAAWQPVTTQ SAD
|
|---|
| |