Gene Bcen2424_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3461 
Symbol 
ID4451542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp291852 
End bp292484 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID639695520 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_837093 
Protein GI116691560 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC ACACCTTCTT CTCGGCCAAC CTGCTGCTCG CCTACACGGC CTATTTCATC 
GGCACGGCCA GCCCCGGGCC GAGCAATCTC GCGATCATGT CGGTCGCCGC GAACCAGGGC
CGCAAGGCGG CGCTCGCATT CGCGCTCGGC GTGATTTCAG GGTCGATGTG CTGGGCGACG
GTGGCGGCGC TCGGCATCTC GGCCGCGCTG CTCGCGTGGT CGAAGCTGCT GGTCGCGATC
AAGGTGTTCG GCGGGCTGTA CCTGCTGTGG CTCGCGTTCA AGTCGGGCCG CACGGCGCTG
GCGGGGCCGC CGGCGGCAGC GGCGAACGCG GCGCGCGAGC AGCGGCTGTC GCGCTTCTAC
GTGCGCGGCG CGATGCTGCA CCTGACCAAT CCGAAGGCGA TTCTCGTGTG GGTGTCGATC
GTCGCGCTGT CGTCGAACGG CGCGGGCGGC GCGCATGGCG CCGTCGTGCC GGGTTGTCTG
GCGATCGGCT GCCTGGTGTT CGGCGGCTAT GCGCTGGTGT TCTCGATGGA CGGGGCGCGC
CGGTTGTATG TGCGCGGCCG GCGCGCGATG GAAGCGTGTC TGGCCGTCGT GTTCGGCGTG
GCGGGCGTTC GGCTGCTGGT GACGAACGTC TAG
 
Protein sequence
MNVHTFFSAN LLLAYTAYFI GTASPGPSNL AIMSVAANQG RKAALAFALG VISGSMCWAT 
VAALGISAAL LAWSKLLVAI KVFGGLYLLW LAFKSGRTAL AGPPAAAANA AREQRLSRFY
VRGAMLHLTN PKAILVWVSI VALSSNGAGG AHGAVVPGCL AIGCLVFGGY ALVFSMDGAR
RLYVRGRRAM EACLAVVFGV AGVRLLVTNV