Gene Bcen2424_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3453 
Symbol 
ID4451534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp282959 
End bp283795 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID639695512 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_837085 
Protein GI116691552 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.1806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT CATCCACCGC CGCGCGCAAA CCGTTCGGCC GCCTGCTGCT GACGGGCGCG 
GCCGGCAACC TCGGCCGCCA GTTGCGCGGC GCGCTCGCCG ACTGGGCCGA CGTCGTGCGC
GTCAGCGACA TCGCGGCGCT CGGCGACGCG GCCGCGCATG AAGAACTCCG CGTGGTCGAC
CTGGCCGACC GGCCGGCCGT GATGCAGCTC GTCGACGGCG TGGACGCGAT CGTTCACCTC
GGCGGCATTT CGGTCGATGC GCCGTTCGAC GATCTGGTCG GCGCGAACAT CACCGGCACG
TACAACCTGT ACGAAGCCGC GCGCAAACAC GGCGTGAAGC GCGTCGTGTT CGCGAGCTCG
AACCATGCGA TCGGTTTCCA TCCGGTCACC GAGGTGCTCG ACGCCGATGC GCCGCTGCGC
CCGGACAGCC TGTACGGCGT GACGAAGTGC TTCGGCGAAT CGCTGTCGCG CTACTACTTC
GACCGCTTCG GGATCGAAAC CGTATGCCTG CGGATCGGCT CGTCGTTCGA GGTGCCGAAG
AACCCGCGCA TGCTCGTCAC GTTCCTCAGC TATCGCGATT TCATCGAGCT CGTGCGCTGC
TCGCTGCTGA CGAACCGCGT CGGCCACGCG ATCGTCTACG GCGCGTCGGA CAACCCGGTG
AAGTGGTGGG ACAACACGAA GGTCGGTTTC CTCGGCTTTC GCCCGCGTGA CAGCTCCGAG
CAGTTCGCGG GGCTGTTCCC GGTGACGGCG CCGACGGCCG AATACGACGA TCCCGCGCAG
CGGTTCCAGG GCGGCGGGTT CGTCGTCGGC GAGCCGATGG AGCGCAACGT GAAATAA
 
Protein sequence
MNASSTAARK PFGRLLLTGA AGNLGRQLRG ALADWADVVR VSDIAALGDA AAHEELRVVD 
LADRPAVMQL VDGVDAIVHL GGISVDAPFD DLVGANITGT YNLYEAARKH GVKRVVFASS
NHAIGFHPVT EVLDADAPLR PDSLYGVTKC FGESLSRYYF DRFGIETVCL RIGSSFEVPK
NPRMLVTFLS YRDFIELVRC SLLTNRVGHA IVYGASDNPV KWWDNTKVGF LGFRPRDSSE
QFAGLFPVTA PTAEYDDPAQ RFQGGGFVVG EPMERNVK