Gene Bcen2424_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3452 
Symbol 
ID4451533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp281779 
End bp282888 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content67% 
IMG OID639695511 
ProductLacI family transcription regulator 
Protein accessionYP_837084 
Protein GI116691551 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.164472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAT CTGCTCGCAG CCATCCGCAC TTTCCCGATA TCGACGGGTG GCTGCGCGCC 
GTCTTTTTCT GCCACAATCC GGCGTTATCG AACGAAAACG TTACCCTTCC GATGAAAAAA
GTTTCCTCGA CGATCCGCGA CGTGGCCGCC GAAGCCGGCG TGTCGGTCGC GACGGTATCG
AAGTACGTGA ACGGCACGCA ACGCTTCTCG CCGACCGTCG AGGCACGGCT CAAGGAGGCC
ATCGAGCGGC TCGGCTACCG ATCGAATCCG CTTGCGCGCT CGATGATCAC CGGCCGCACG
CGCACCATCG GCCTCGTGAT CCTCGACATC AGCAACCCGC ACTTCACGAA CGTCGTGAAA
GGCGCGAACC GCGTCGCGCT GCAGCACGAC TACACGCTGC TGCTCGTCGA TACCGAGGAA
AGCCAGGCGC GCGAACGTTC GCTGATCGAG GCGCTCGCGC AGCGCGTCGA CGGGCTGATC
GTCAGCACGC GGATGCCCGA CGAGGAAGCC GGCTGGATGC TCGACCTCAA CAAGCCGCTC
GTGCTGCTGC GTCGCAGCCC CGGCCTGCCG ATTCCGAGCG TCGGCATCGA CAACCGGCTG
TCGACCTACA TGCTCGCGCG CCACCTGCTC AACCTCGGCC ATACGCGCAT CGCATATCTC
GGCTTCGGCA CCGCGCGCGT GAACGACGAA CGAATCCAGG GCGCGCGCGA CTGCCTCGCC
GAAGCGGGGC TCACGCTCGA CGTGCACGAC GCGCACGCGC CGACCGCCGA GGCCGGCGAG
CGCGCGTGCT CGCGCGTGAT GCTCGGGCCG CAGCGCCCGC AGGCCGTGAT CTGCTACAAC
GACCTGATCG CGCTCGGCTT CATGAAGGAA GCCGCGTCGC TCGGCTTCCG GCTGCCGCAG
GACGTGTCCG TCGCCGGCAT CGACAACGTG CCGTACGGCG CATACGCGGC GCCCGCGCTG
ACGACCGTCG ACATCCAGAG CGAGAACATG GGCGAACTCG CGATGCAGAA GCTGATCGAT
GCGCTCGCCG GGCGCACCGA CGCGAGCTAT TCGACGTTCG AGCCGCGGCT GATCATGCGC
GCGTCGACCG CATCGGCCGC GGCCGGATAA
 
Protein sequence
MVESARSHPH FPDIDGWLRA VFFCHNPALS NENVTLPMKK VSSTIRDVAA EAGVSVATVS 
KYVNGTQRFS PTVEARLKEA IERLGYRSNP LARSMITGRT RTIGLVILDI SNPHFTNVVK
GANRVALQHD YTLLLVDTEE SQARERSLIE ALAQRVDGLI VSTRMPDEEA GWMLDLNKPL
VLLRRSPGLP IPSVGIDNRL STYMLARHLL NLGHTRIAYL GFGTARVNDE RIQGARDCLA
EAGLTLDVHD AHAPTAEAGE RACSRVMLGP QRPQAVICYN DLIALGFMKE AASLGFRLPQ
DVSVAGIDNV PYGAYAAPAL TTVDIQSENM GELAMQKLID ALAGRTDASY STFEPRLIMR
ASTASAAAG