Gene Bcen2424_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3447 
Symbol 
ID4451510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp276314 
End bp277168 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID639695506 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_837079 
Protein GI116691546 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.963052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTC ATACCCGCAT CACCCGCAAG ACCGTCACCG CGATCCGTTC GACCAAAGGC 
ATCGGCAGCC TCGTGTCGCT GACCGCGTAC TCCGCGCCGA TGGCGAAGCT CGTCGATGAA
GTGGCCGACG TGATCATCGT CGGCGACTCC GTCGGCATGG TGCTGTACGG GATGCCCGAT
ACGCTGCGCG TCACGCTCGA CATGATGATT GCACATGGGG CGGCCGTCGT GCGCGGCGCC
GCGCAGGCGT GCGTCGTCGT TGACCTGCCG TTCTCCACGT TCCAGGAATC GCCCGCGCAA
GCGTATCGCT CTGCCGCGCG GCTGCTCGCC GAAACCGGCG CGCAGGCCGT GAAGCTCGAA
GGCGGCTGCG AGATGACCGA CACCATCCGC TTCCTGACCG ATCGCGGCAT TCCGGTGATG
GCGCATGTCG GCCTCATGCC GCAGCAGGCC AACGCGGCGG GCGGCTTCCG CGCGCAGGGC
ATGGACCCGC GTTCGGCCGC GCAGGTGTTC GACGCCGCGT GTGCGGCCGA GCGGGCCGGC
GCGTTCAGCG TCGTCATCGA AGGCACCGCC GAAGCGCTCG CGCGCCACCT GACCGAAACG
CTGACGATCC CGACGATCGG CATCGGCGCA TCGCCCGCGT GCGACGGGCA AGTGCTCGTG
ACCGAGGACA TGATCGGCGC GTTCGATGCG TACACGCCGC GCTTCGTGAA GCGCTACGCG
GATGCGAACG CGGTGATGCG CGACGCGATC CGCCAGTACG CTCACGACGT GCGGCAGCGC
GTGTTTCCCG AGCCCGCGCA TTGCTTCGGA TACGGCAAGC CGCTGCAACT GGCGGACGCG
GCCACCGCCG CGTGA
 
Protein sequence
MSAHTRITRK TVTAIRSTKG IGSLVSLTAY SAPMAKLVDE VADVIIVGDS VGMVLYGMPD 
TLRVTLDMMI AHGAAVVRGA AQACVVVDLP FSTFQESPAQ AYRSAARLLA ETGAQAVKLE
GGCEMTDTIR FLTDRGIPVM AHVGLMPQQA NAAGGFRAQG MDPRSAAQVF DAACAAERAG
AFSVVIEGTA EALARHLTET LTIPTIGIGA SPACDGQVLV TEDMIGAFDA YTPRFVKRYA
DANAVMRDAI RQYAHDVRQR VFPEPAHCFG YGKPLQLADA ATAA