| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3406 |
|---|
| Symbol | |
|---|
| ID | 4451201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 236442 |
|---|
| End bp | 237455 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639695465 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_837038 |
|---|
| Protein GI | 116691505 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT TCAAGAGCCC GGCGGCCGGC GGCGCGCACA GTCACGCGTT TCTGGGCGCC
GCCCATGCGC GCAACGAGCG GAAGACGTGG ATGGTCATCG GCCTGTGCAC GGCGATGATG
ATCGCCGAGA TCGTCGGCGG CACGCTGTTC GGGTCGCTCG CGCTGGTCGC GGACGGGCTG
CACATGTCGA CGCATGCGGG CGCGATGCTG ATCGCCGCGC TGGCCTATAC CTATGCGCGC
CGGCACGCCG ACGATCCGCG CTTCGTGTTC GGCACCGGCA AGCTCGGCGA CCTGGCCGGC
TTCACGAGCG CGATCGTGCT GGCGATGATC GCGTTGCTGA TCGGCTATGA GGCGATCGCG
CGCCTGCTGG CGCCGGTGCC GATTCACTTC GACGAAGCGA TTCCGATCGC CGTGCTGGGG
CTTGCCGTGA ACCTCGCCAG CGTGTGGCTG CTGAGCGGCG ATCACCATCA CGGGCACGAT
CACGGCCATC ATCATGCGCA TGGGCACGAC GATCACCATG ACCATGACCA CGACGACGCA
CACCACGCGC ATCATGCTCA CGGGTCGCAC TCGGCCGCGC ATCGCGATCA CAACATCCGG
TCGGCCTACG TTCACGTGAT CGCCGACGCG GCCGTGTCGG TGCTGGCGAT CGTCGGCCTG
CTGCTCGCGC GGGCGTTCGG ATGGGTCTGG ATGGACCCGC TCGCGGGCAT CGTCGGTGCG
CTGGTGATTG CCAACTGGGC GTACGGGCTG ATGCGCGATA CGGGCGGAAT CCTGCTCGAC
GTCAACGTCG ATCGCAAGCT GACCGACAAC GTGCGCCGCG CGATCGAGGC GCTCGGCGAC
AAGGTCAACG ATCTCCATGT GTGGCGCGTG GGCCCCGGGC ACATGAGCGC GATCGTGTCG
GTCGAATCGG GCGACGCCGC GCGCGATGCG CGCTTTTATC ATGCGCTGGT CGCGGGCTTC
GACGGCGTGT CGCACGTGAC CGTCGAAGTG CTGACGCCCG CGAAGGCGGC CTGA
|
|---|
| Protein sequence | MNEFKSPAAG GAHSHAFLGA AHARNERKTW MVIGLCTAMM IAEIVGGTLF GSLALVADGL
HMSTHAGAML IAALAYTYAR RHADDPRFVF GTGKLGDLAG FTSAIVLAMI ALLIGYEAIA
RLLAPVPIHF DEAIPIAVLG LAVNLASVWL LSGDHHHGHD HGHHHAHGHD DHHDHDHDDA
HHAHHAHGSH SAAHRDHNIR SAYVHVIADA AVSVLAIVGL LLARAFGWVW MDPLAGIVGA
LVIANWAYGL MRDTGGILLD VNVDRKLTDN VRRAIEALGD KVNDLHVWRV GPGHMSAIVS
VESGDAARDA RFYHALVAGF DGVSHVTVEV LTPAKAA
|
|---|
| |