| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3401 |
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| Symbol | |
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| ID | 4451196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 229603 |
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| End bp | 231126 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639695460 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_837033 |
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| Protein GI | 116691500 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGGC AATCACTGAT GCGTGCGGTG TTGATCGCGT CCGCCGGCGC GGTGCTCGTC
GGCGCAGGCT ATTTCGCGGG CGTTCGCCGT GCGACGAACG GCGCGGCGAC GGCCTCAGTG
CCCGCCGCTG CGCCGTCGGG TATGCCGGCT CAGCAGGCCG CACGCAAGGT GCTGTACTGG
CACGACCCGA TGGTGCCGAA CCAGCACTTC GACAAACCGG GCAAATCGCC GTTCATGGAC
ATGCAGTTGC AGCCGGTCTA TGCGGACGAA GGCGGTGCCG CGGCAGGCAT CCGGATCGAT
CCGGGCCTGC AGCAGAACCT CGGCATCCGC TATGCGACCG TGCGTCGGCA GCAGACGGCG
GCCGGCTTCG ACGCGGTGGG CACCACGCAG TTCGACGAAG CGCGCGTGGA GGTCGTGCAG
TCGCGCGTCA CGGGCTACAT CGACCATTTG TATGCACGCG CGCCGATGCA GCGCATCGCG
AAGGGCGCGC CGGTCGCATC GTTGTTCGTG CCCGACTGGC TCGCGCCGCA GGAGGAATAT
CTCGCGCTGA AGCGCGGCGG CATGGACGGC AACCTGCTCG ATGCGGCGCG CGCACGAATG
CGCGCGCTGT CGATTCCGGA CGGGATGATC GCGAATCTCG ATCGTACCGG CCGCGCGCAG
ACGCACGTCG TGCTGAGCGC GCCGGAGACG GGCGTCGTCA GCGAGTTGAA CGTGCGCGAC
GGCGCGATGG TCGCGCCCGG CCAGACGCTC GCGAAGATCG CCGGGCTGGC GACGCTGTGG
CTGGTCGTCG AGGTGCCGGA AGCGCTCGCT TTGAACGTGC AGCCGGGAAT GTCGGTCGAC
GCGACGTTCG CGGGCGATCC GGCCCGGCAT TTCAGCGGCC GCATCCGCGA AGTGCTGCCC
GGCATCAGCA CGGGCAGCCG CACGCTGCAG GCGCGTGTGG AGATCGACAA CGCATCGCTG
AAGCTCACGC CCGGCATGCT GATGCGCGTG CGGGTCGCCG CGAAGGAGAC GGTGTCGCGC
CTGCTCGTGC CGTCCGAGGC CGTGATCGCG ACCGGCCAGC GCACGATCGT CATCGCGAAG
CTCGGCGACG GCCGGCTCCA GCCGGTGTCG GTGACGGTCG GCAACGACGT CGGCGGCGAC
ACGGAAGTGC TCGGCGGGCT GAACGAAGGC GATACGGTTG TCGCATCGGG GCAGTTCCTG
ATCGATTCGG AAGCCAGCCT GAAAAGCGTG CTGCCGCGGC TGGAGCGGGC GGCAGGCGCA
AGCTCGGCCG CATCGTCCGC GACGGCAAGC GCGCCGGTCT ACGAAACCAC CGGCAAGGTG
GAGAACGTCA CGGCCGACGA CATCACGTTC TCGCATCAGC CGGTGCCGGC GCTCGGCTGG
GGCGCGATGA CGATGGCGTT CGGCAAGCCG TCGGCGCACG CGTTTCCGGA CGTGAAGCCG
GGGCAGACCG TGCGTTTCGC GTTCACGCAG GCCGACGACG GCTACCGGCT GACGAAGGTC
GAGCCGCAGG GAGGTGAGCG ATGA
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| Protein sequence | MTRQSLMRAV LIASAGAVLV GAGYFAGVRR ATNGAATASV PAAAPSGMPA QQAARKVLYW
HDPMVPNQHF DKPGKSPFMD MQLQPVYADE GGAAAGIRID PGLQQNLGIR YATVRRQQTA
AGFDAVGTTQ FDEARVEVVQ SRVTGYIDHL YARAPMQRIA KGAPVASLFV PDWLAPQEEY
LALKRGGMDG NLLDAARARM RALSIPDGMI ANLDRTGRAQ THVVLSAPET GVVSELNVRD
GAMVAPGQTL AKIAGLATLW LVVEVPEALA LNVQPGMSVD ATFAGDPARH FSGRIREVLP
GISTGSRTLQ ARVEIDNASL KLTPGMLMRV RVAAKETVSR LLVPSEAVIA TGQRTIVIAK
LGDGRLQPVS VTVGNDVGGD TEVLGGLNEG DTVVASGQFL IDSEASLKSV LPRLERAAGA
SSAASSATAS APVYETTGKV ENVTADDITF SHQPVPALGW GAMTMAFGKP SAHAFPDVKP
GQTVRFAFTQ ADDGYRLTKV EPQGGER
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