Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3394 |
Symbol | |
ID | 4451189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 223233 |
End bp | 224117 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639695453 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_837026 |
Protein GI | 116691493 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCA ACGTGAACGC CATCCACCGC GACAACGATC GCATCAACAT ATCGTTCAAG GCATTGGGCG AGCTGATCGA GACGGTCGGC ACGCCGCACT TCGTGCCGCG CCTCACGCAA CTGCTGAACG AGGTCGTGCC GCTCGACGTC GCGCACGTCG AACGCTCGCG CGTCGACACG ACGATGCCCA CCGGCTACCG TTGCGAATGG ATCGGCAGCA GCGGCATCGG CACCGCGTCC ACCGACATCT CCGACGTGAT GACGCTCTAC TACGAGCGCT TTCTCGACAG CGACCCGCTG TTCGCGGGGC TGCGCGGCAA GACCGGCACG ATGCTCGTCG TGCGCGACAT CGCGGCGATC CCGCCCGGCG AATTCCGCCA GCGGCTGTTC GACGACGTGC ATATCGGCCA CGAATGCGTG CTCGCACGGG GCACGCGCTA TTCGCAGCAT TCGATCGCCC TGGAGCGCGG CCGTGACCGG CCGCCGTTCA CGCTCGCCGA GATGAACCGC TTCCGCAGCA TCAGCGACAT GCTGTTTCCG CTGCTCGAAC TCCATGCGTC GACCACCGCC GCACGGCGCA TCGCGCATGC GACGCCCGAC GTCCATCCGC TCGCGCAGTT CGATGCGCGG CTCGCGGCCG ACGGCGTGAA GCTGTCGAAG CGCGAATACG AAACCTGCAA GCACCTGCTC TCCGGCAAGA CCGTGCCGGA AACCGCCGAC ATTCTCGGCG TGCGCGTCGC GTCGGCCGAG TCGTACGTGA AACGTGCATT CGCGAAGCTC GGCGTGCGCA CGAAGCGCGA ACTCGCCGCA TGGGGTTCGG CCACCGCCGT GCTCCCCGCC GCCGGATCGT ATGACGACGG CGCACCGCCG GCCATCCCGC GCTGA
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Protein sequence | MLLNVNAIHR DNDRINISFK ALGELIETVG TPHFVPRLTQ LLNEVVPLDV AHVERSRVDT TMPTGYRCEW IGSSGIGTAS TDISDVMTLY YERFLDSDPL FAGLRGKTGT MLVVRDIAAI PPGEFRQRLF DDVHIGHECV LARGTRYSQH SIALERGRDR PPFTLAEMNR FRSISDMLFP LLELHASTTA ARRIAHATPD VHPLAQFDAR LAADGVKLSK REYETCKHLL SGKTVPETAD ILGVRVASAE SYVKRAFAKL GVRTKRELAA WGSATAVLPA AGSYDDGAPP AIPR
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