Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3392 |
Symbol | |
ID | 4451187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 221672 |
End bp | 222337 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639695451 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_837024 |
Protein GI | 116691491 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.603365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCC CGCTCGATCA ATACGCGAAC CAGTACGTGC AGTTCGAGGA CGAACGCACG CGCCCGGTGC GCGATCTGCT GGCCGCCGTG CCGAACACGC CGATCCATAC CGCGATCGAT ATCGGCTGCG GGCCGGGCAA TTCGACGGAA GCGCTGATCG CGCGCGCGCC GGACGCGACG ATCCACGGGA TCGATGCGTC GGCGGACATG ATCGAGGCCG CGCGCAAGCG CCTGCCGGCG TTGCGTTTCG ACCTTGCCGA TGTCACCACC TGGGACGATC CGGGAGGCTA TGACCTGATC CTGTCGAATG CGGTGCTGCA ATGGGTGCCT GCGCACGACA CGCTGTTCCC GAGGCTCGTC GGCCGGCTCG CGCGAGGCGG CCATCTCGCG GTGCAGATGC CCGACAATCT CGACGAACCC GCGCACCGGC TGATGCGCGA AGTCGCCGCA GGCGGGCCGT GGGCCGACAA GCTGAAAGGC GCGGCGCGCA CCGAGCGATT CGATGCGCGC TATTACCATG CGCTGCTGGC GCCGCTGGGT TCGCGTGTGG ACGTGTGGCG CACGACCTAT TACCACCCGC TGCGCGGCGG CGCGGACGCG GTCGTCGAAT GGTTCAAGGG CAGCGCACTG CGGCCGTTCC TCGCGGCGCT CGACGCGTCG CGATAG
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Protein sequence | MTTPLDQYAN QYVQFEDERT RPVRDLLAAV PNTPIHTAID IGCGPGNSTE ALIARAPDAT IHGIDASADM IEAARKRLPA LRFDLADVTT WDDPGGYDLI LSNAVLQWVP AHDTLFPRLV GRLARGGHLA VQMPDNLDEP AHRLMREVAA GGPWADKLKG AARTERFDAR YYHALLAPLG SRVDVWRTTY YHPLRGGADA VVEWFKGSAL RPFLAALDAS R
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