Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3319 |
Symbol | |
ID | 4453832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 154724 |
End bp | 155548 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639695380 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_836953 |
Protein GI | 116691420 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGC TCGCGACCAT GGCGATCCTG TTGGCGTGCT TTGCGGCGCA AGCAGTCGAC GCACACGTCA TGCCGGACTG GACGCACGAT GCCAGGGTGC GCAAAGTGCG TTATGTGCCG GACGAAGTCG TGCGCATTAT CGCGCAGCGC GGCTTTGCCA CCCACGTCGA GCTGGATCCG ACCGAGCACA TTCTTGTGGT TGCGCCAGGG GACCGCGACG GTTGGTATGT GGTAGCCAAT CGGGGAGACC ATGACGTTTA TCTGAAGCCG AAACTCGCCG CTCATGACAC GAATCTGATT GTCCGGACCG ATCGGCGCAG CTACAGCTTT GATCTTCTCG TTCTGCCCCT GAAAGCACGC TTTGGCAACG CGCACGAGAT GTACCGGGTA AGTTTCGTGT ATCCGGACAC CGCTGCGTCG GATGCGTCTA TTGCCGCGCG CTTGGCGTGT TTGCAGAAAC GGCTGTCTCA GCCGTCCGTC GTGCGTAACG CCGCGTACTC GATGCAGGTC ATGCCACATG CAGAGGATAT CGCACCGTCC GCAGTATGGG ACGACGGTCG CTTTACGTAC ATTCGAATCC CCAACAATCG TCGTATACCC GCGATCTTCC GAATCGAGGA CGATGACACC GAACGCGTGG TGGACAAGCA CATAGACCGT GATGTGGTGG TCGTCCATGA GCTTGCTCGC CGACTCGTGT TGCGTCTGGG CGATGAGGCG GTTGGTTTGT GGAACGACGC ATTCGACATT GATGGCGTCG CGCCGCGGCA CGGTGTGACG GTCGACGGCG TGCGCCGCAC GCTGCGGAGT CGCGAACATG ACTGA
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Protein sequence | MKTLATMAIL LACFAAQAVD AHVMPDWTHD ARVRKVRYVP DEVVRIIAQR GFATHVELDP TEHILVVAPG DRDGWYVVAN RGDHDVYLKP KLAAHDTNLI VRTDRRSYSF DLLVLPLKAR FGNAHEMYRV SFVYPDTAAS DASIAARLAC LQKRLSQPSV VRNAAYSMQV MPHAEDIAPS AVWDDGRFTY IRIPNNRRIP AIFRIEDDDT ERVVDKHIDR DVVVVHELAR RLVLRLGDEA VGLWNDAFDI DGVAPRHGVT VDGVRRTLRS REHD
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