Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3317 |
Symbol | |
ID | 4453830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 153134 |
End bp | 153841 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639695378 |
Product | type IV secretion system family protein |
Protein accession | YP_836951 |
Protein GI | 116691418 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAT ACCTATTCAC GCATGTACTG ATGTGCGCCA TTGTCGCGGG CTCGGCGTCG TTTATTGAGC CGGCGAAAGC GGAAATCTAT TCGGTCTATG ACGAAAAGAA CGTCGCCCAG GCGATCGCGA TGGTCGGGCA GCTCAAACAA CAAGTGCAGC AGGAGATGGC GTTGTACCGC TCAATGAGCG GCGCGCGCGG CTTTGGTGCG TTGCTGGATA GACCGGGGGT GGTTAATGCG TTGCCGGGCA ATTGGCAACG CGTGTATGCA GCGATTCGCG AGGGAGGGTA TGCCGGGTTG ACTGGTCCGG CCCAGGCGCT GCGTGCGCAA AGCAAGCTCT ACGACTGTGA AGATCAGCAT GGCATCGATC AGCGAATTTG TCAGCGTGCA TTAAACAAGC CATTTCAGGA TAAGGCACTT GGCCTGCAGG CATATCAGAC CGAGCTTGCC GAACTCGACC GGATTGAACG TCTGATGCGG CATATCGATA CGACACGGGA TCCGAAGGGT ATCGCGGAGC TGCAAGCACG AATCCAGTCG GAGAGTGTGG CAGTCGGCAA CGAAATGACG AAGTTGCAGA TGTTCAAGAT GCTCGCGGAA ACCGAGGATC GCTTGATTGC CGAGCAGCAG ACTGAACTGC TTCTTAAGCG AGCGGGCAAC ACGCGGCGAC TTCAGGATCA GATGGTGCCG ATCACGTTTG GTCGATAA
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Protein sequence | MKRYLFTHVL MCAIVAGSAS FIEPAKAEIY SVYDEKNVAQ AIAMVGQLKQ QVQQEMALYR SMSGARGFGA LLDRPGVVNA LPGNWQRVYA AIREGGYAGL TGPAQALRAQ SKLYDCEDQH GIDQRICQRA LNKPFQDKAL GLQAYQTELA ELDRIERLMR HIDTTRDPKG IAELQARIQS ESVAVGNEMT KLQMFKMLAE TEDRLIAEQQ TELLLKRAGN TRRLQDQMVP ITFGR
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