| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3301 |
|---|
| Symbol | |
|---|
| ID | 4453780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 141148 |
|---|
| End bp | 141987 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639695364 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_836937 |
|---|
| Protein GI | 116691404 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCC CGACGGGCCG GCGCGAAGCG CTGGAAGTCC TGACTCGGCG GGGATTATCG
CAACGCAAGG CATGTCGTTA CCTGGGGCTG AGCCGCCGGG TGGCGATCTA CACGCTCAAG
CAACCGGAGA AAGACCGGAG CTTGGGCGAG CGGTTGATCG CGGCTTCCCA AGAGGTGCCA
CGCTTCGGTT ATCGTCGGAT CTCGGCTTGG CTGTCGTTGG GCGAATCGCG TGTGCGCCGG
ATGTGGCGTG CGCTGAAGCT GAACATCCCG AAGCGCCGGC CGCGTCGACG GCGTTGCGGC
AGCGATATTC GCCTGCCGGG TGCGACGAAA CCCAATTCGG TCTGGAGCTA CGACTTCGTC
CACGACCAGT TGGTCGACGG TCGAGTCTTG AAGATGCTGT GCGTGATCGA CGAATACACC
CGCGAATGCC TAGCAATCGA GGTCGGGGCC AGCTTGCGTT CGCAAGACGT GATCCTGGTC
CTGTCGCGAT TGATGCGCCT ATACGGCAAG CCGGCGTTCA TTCGGTCCGA CAACGGCGCG
GAATTTACGG CGGCCAAGGT TATGCGCTGG CTGCGTGACG CGGCAATCGG GCCAGCCTTC
ATTACGCCCG GTAACCCGTG GCAAAACGGC TTCGTCGAAA GCTTCAACGG CAAGCTGCGC
GACGAGCTGC TGAATCGGGA ATGGTTCCGC AGCCGCGCCG AGGCCAAGGT GCTCATCGAG
CGCTGGCGAC AGTTCTACAA CGAGCGTCGG CCGCATAGCG CTCATCGTTA CCAACCTCCT
GCCACGGTCC GTCGAGCCTG GCTGGATTCC GAGAATATCG ACAGGCGACT CACTGCTTAA
|
|---|
| Protein sequence | MNSPTGRREA LEVLTRRGLS QRKACRYLGL SRRVAIYTLK QPEKDRSLGE RLIAASQEVP
RFGYRRISAW LSLGESRVRR MWRALKLNIP KRRPRRRRCG SDIRLPGATK PNSVWSYDFV
HDQLVDGRVL KMLCVIDEYT RECLAIEVGA SLRSQDVILV LSRLMRLYGK PAFIRSDNGA
EFTAAKVMRW LRDAAIGPAF ITPGNPWQNG FVESFNGKLR DELLNREWFR SRAEAKVLIE
RWRQFYNERR PHSAHRYQPP ATVRRAWLDS ENIDRRLTA
|
|---|
| |