Gene Bcen2424_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3288 
Symbol 
ID4453749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp128563 
End bp130533 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content69% 
IMG OID639695352 
ProductBeta-galactosidase 
Protein accessionYP_836925 
Protein GI116691392 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1874] Beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCG GCGTTTGCTA TTACCCCGAA CACTGGCCGC GCGAACAATG GGAGCGCGAT 
GCGCTGCGCA TGGCCGAACT GGGCCTGACG CGCGTGCGGA TCGCCGAATT CGCGTGGAGC
CGGATGGAGC CGGCGCCCGG CCGCTACGAC TGGGCATGGC TCGACGAAGC GATCGACACG
CTCGCGCGTC AGCAGTTGAA GATCGTGCTC GGCACACCGA CCGCCGCGCC GCCGAAATGG
CTCGTCGATC GTCATCCGGA GATGCTGCCG GTGGCCGCCG ACGGCGCGGT GTGGCAGTTC
GGCTCGCGCC GCCATTACGA CATCGCGAGC CCCGTGTATC GCGAGCACTG CGTGCGCATC
GTGGACGCGA TGGCGCGACG CTACGGCACG CATCCGGCAG TCATCGCATG GCAGACCGAC
AACGAGCTCG GCTGTCACAA CACGCTGCCG AGCTATACGC GTGCGGCGCT CGAAGGGTTT
CGCGCGTGGC TCGCCGTGCG CTATGGCGAC ATCGATGCGC TGAATCGTGC ATGGGGCAAC
GTGTTCTGGA GCATGGAGTA TCGCGGTTTC GACGAGATCG AATTGCCGCG CCATACGCCG
ACCGATGCGA ATCCCGCCCA TCTGCTCGAC TTCCGCCGCT ATCAGTCGGA CGAGGTCGCG
CGGTTCCACG CCGTGCAGGT CGATGCGATC CGTCCGCACG CGCCGGGCCG CGATGTGCTG
CACAACTTCA TGGGCTTTTT TACCGAGTTC GATCACCATG CGTTTGCGCG CGGCGGGCTC
GACGTCGCTG CGTGGGACAG CTATCCGGTC CCGCGTACCG AAGTACTGCC GCTCGACGAA
GCGGACAAGC GGCGCTGGGC TCGTACCGGC CACCCGGACG TTTCGGCGTT CTCGCACGAC
CTGTATCGCG GCATCGGCAA CGGGCGGATG TGGGTGATGG AGCAACAGGC CGGGCCGGTG
AACTGGGGGC CGTACAACCC GGTGCCGCAC GCAGGCGCGG TGCGGCTGTG GACGTGGGAA
GCGTTCGCGC ATGGCGCGGA GCTCGTGTCG TATTTCCGCT GGCGGCAGTA TCCGCATGCG
CAGGAGCAAC TGCATTCGGG GCTCAACGCA CCGGACGACC GGCTGTCGCC GGGCGGTCGT
GAAGTGGCGC GTGTGGCGTG CGAACTGGCC GCGCTGGATC CCGCGTTCGT CGGCGGTCCG
CGTGAGACGG CCCGCGTCGC GCTGCTGTTC GACTACGAGG CCGACTGGAT GATCCGGATC
CAGCCGCACG GCGCCGACTT CGACTATCAG CAGCACGCGT TCGACTGGTA TCGCGCGCTG
CGCGAGCTGG GCCTCGACGT CGACATCGTC GCGGCCGGCG CCGACCTGTC GCGTTATGCG
CTCGTCGTCG CGCCGACGCT GCCGGTCGTC ACGGATCGCA TCGTCGAGCA GGTTGCGGGC
GGATTCGCCC ACTGGCTGTT CGGGCCGCGC ACGGGTTCAC GCACCGCGGC ATTCGCGATC
GCGCCGGGTC TCGCACCGGG CAAGCTGCGC GACGTGCTGC CGGTGAGGAT CGGCCAGGTC
GAGTCGCTGC GGCCATCGCT CGCGCCGCGT GTCTCGTTCG ATGGCGTCGA CGGCCATGCG
CTGAAATGGC GCGATCACAT CGACAGGGAA GCGGCACCGG GCGTCGACGT GCTCGCCGCG
TGCGACGACG GCGTGCCGGC ACTCGTGCGG CGCGCTCACG TGACGATGGC GACCGCCTGT
TTCGACCGCG CGCTGTTGCG CGCGATCGTC TCCCGCTGCG CGCGAGATGC CGGGTTGCAG
GTACGGGCGC TCCCGGACGG TGTGCGGTTG CGTCGACGCG GGCGCGTCAC GTTCGCGTTC
AACTACGGCG ACGCACCCTG CCTGCTGCCC GCGCCGGACG GTGCGCGCTT TGTGCTCGGC
GGCCGGGAAC TCGGCGCGGT GGACGTTGCC GCCTGGGTCG AGCCGGACTG A
 
Protein sequence
MHLGVCYYPE HWPREQWERD ALRMAELGLT RVRIAEFAWS RMEPAPGRYD WAWLDEAIDT 
LARQQLKIVL GTPTAAPPKW LVDRHPEMLP VAADGAVWQF GSRRHYDIAS PVYREHCVRI
VDAMARRYGT HPAVIAWQTD NELGCHNTLP SYTRAALEGF RAWLAVRYGD IDALNRAWGN
VFWSMEYRGF DEIELPRHTP TDANPAHLLD FRRYQSDEVA RFHAVQVDAI RPHAPGRDVL
HNFMGFFTEF DHHAFARGGL DVAAWDSYPV PRTEVLPLDE ADKRRWARTG HPDVSAFSHD
LYRGIGNGRM WVMEQQAGPV NWGPYNPVPH AGAVRLWTWE AFAHGAELVS YFRWRQYPHA
QEQLHSGLNA PDDRLSPGGR EVARVACELA ALDPAFVGGP RETARVALLF DYEADWMIRI
QPHGADFDYQ QHAFDWYRAL RELGLDVDIV AAGADLSRYA LVVAPTLPVV TDRIVEQVAG
GFAHWLFGPR TGSRTAAFAI APGLAPGKLR DVLPVRIGQV ESLRPSLAPR VSFDGVDGHA
LKWRDHIDRE AAPGVDVLAA CDDGVPALVR RAHVTMATAC FDRALLRAIV SRCARDAGLQ
VRALPDGVRL RRRGRVTFAF NYGDAPCLLP APDGARFVLG GRELGAVDVA AWVEPD