| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3280 |
|---|
| Symbol | |
|---|
| ID | 4453741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 120537 |
|---|
| End bp | 121628 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639695344 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_836917 |
|---|
| Protein GI | 116691384 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.32687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCG TGATGGTGCT CTCATACTCG CGCGATATCT ACCTGCGCTT CTTCCTTGAT
GCGCGAATGG AGAACTTCCT GCGCGGCCAC ATCGGCGCGT TTAACACATG GTGTGGACTA
CCAAGAGTCC TGCTGTACGA CAACCTGAAA TCGGCCGTGC TCGAGCGCGT TGGTGATGCG
ATCCGCTTCC ATCCGACGCT GCTCGCGTTC GCCGGCCACT ACCGCTTCGA GCCTCGGCCT
GTCGCCGTTG CGCGCGGCAA CGAGAAGGGA CGCGTGGAAC GCGCGATCCG CCATGTTCGA
GAAGCCTTCT TCGCCGCGCG CAAGTACACC GATCTCGATG ATCTGAACGC GCAAGCCGAG
CAATGGTGCC GTACCCAGGC GGCCGACCGG CCATGCCCTG AGGATCGCAC GATGACCGTG
CGCGAAGCGT TCGCTCGCGA GCAGCCGTTG TTGTTGACGT TGCCCGACAA TCCATACCCC
GTCGAAGAGC AACTGGCCGT GAAGGTGGGC AAGACGCCGT ACGTGCGCTT CGACCTGAAC
GATTACACGA TCCCGCATAC CCACGTGCGT CGCACGTTGA CCGTCCGGGC CGACCTCAAC
CAGGTGCGGG TGTTCGACGG TGCCGAGATG ATCGCCAGCC ATCGACGTTG CTACGACCGG
GCCGAACAGA TCGAAGACCC ACAGCACCTT AAAACGCTCG AGCAGTTCAA ACGCGAAGCC
CGGCAGCACC GCGGCGTCAA CAGCCTGACC CGAGCGGTAC CGGCCTGCGA GCTCCTGCTG
ATCCGTGCGG CCGAACGTGG CGCAAGCGTC GGCGGGCTGA CGAGCTCGCT GCTACGCCTG
CTCGACCGCT ACGGCGCTGC CGAATTGCAG GCCGCCGTCG AAGACGCGTT GCGTGCGGGA
TCGGCGCATA CCAATACCGT ACGGGCCGCG CTGGAGCGCC GCCGCGCCGC GCGCGGCGCA
CCGCCTCCCG TTGCCATGAA TCTGCCGGAG CACGTACGGC GCAAGGATGC GCCCGTCCAG
CCGCACCGGC TCGATACCTA CGATCAACTG ACTGCGGAGA AAAAGGATGA CGTCGACCCC
GAACAACAAT GA
|
|---|
| Protein sequence | MAFVMVLSYS RDIYLRFFLD ARMENFLRGH IGAFNTWCGL PRVLLYDNLK SAVLERVGDA
IRFHPTLLAF AGHYRFEPRP VAVARGNEKG RVERAIRHVR EAFFAARKYT DLDDLNAQAE
QWCRTQAADR PCPEDRTMTV REAFAREQPL LLTLPDNPYP VEEQLAVKVG KTPYVRFDLN
DYTIPHTHVR RTLTVRADLN QVRVFDGAEM IASHRRCYDR AEQIEDPQHL KTLEQFKREA
RQHRGVNSLT RAVPACELLL IRAAERGASV GGLTSSLLRL LDRYGAAELQ AAVEDALRAG
SAHTNTVRAA LERRRAARGA PPPVAMNLPE HVRRKDAPVQ PHRLDTYDQL TAEKKDDVDP
EQQ
|
|---|
| |