Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3267 |
Symbol | |
ID | 4453696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 107603 |
End bp | 108166 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639695332 |
Product | TetR family transcriptional regulator |
Protein accession | YP_836905 |
Protein GI | 116691372 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.22208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAG GTACGCGCGA CGCGTTGGTT CAAGCTGCAG AAGGCCTGAT GCGCTCGAGG GGTTATGCCG CCTTCAGTTA TGCGGATCTG GCCGAAACCG TTGGCATCCG GAAGGCAAGC ATTCACCATC ACTTCCCGAC GAAGGAAGAT CTGGGCGTTG CGATTGTGGA AGCCTATGTC GCGAGAGTGG TGGAAGCGTT CGAGCGAATC GACCGCGAGA ATGAGGACTT CTGGGGCCGC TTGAACGGAT TTTTCGATAC CTTTCGCGCC AGCAGTGATG GAAGCCTGCT CCCGCTCTGC GGTGCGCTTG CCGCCGAGAT GGCTGCTTTG CCGCCCGAAC TGCAGAAGCT CACGCACCGG TTTTTCGAGC TGCAACTGCG CTGGCTGACC AGGGTCATCG ACAAGGGCAT CAGCGACGGC GAGATCGCCG CCGGTGTGGG GAGCTGCCAG AAGGCGTATC AGGTATTGAG CGTTCTAGAG GGAGCCAGCT TTGTCGAGTG GGCCATGAAG AACGGCGAAA CGCTCGACCG CGGCATCATT CGACTCATCG TCTCCGCAGC ATAA
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Protein sequence | MAVGTRDALV QAAEGLMRSR GYAAFSYADL AETVGIRKAS IHHHFPTKED LGVAIVEAYV ARVVEAFERI DRENEDFWGR LNGFFDTFRA SSDGSLLPLC GALAAEMAAL PPELQKLTHR FFELQLRWLT RVIDKGISDG EIAAGVGSCQ KAYQVLSVLE GASFVEWAMK NGETLDRGII RLIVSAA
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