Gene Bcen2424_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3256 
Symbol 
ID4453685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp96808 
End bp98715 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content62% 
IMG OID639695321 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_836894 
Protein GI116691361 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.653152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CACCGTGGAC TTCCGGCAAT CAATTCGCGA CCACCACCAT TCCGGCCTTG 
CTGATCGAGC GCGTGAAGAA CGACGCCGAC GCAAACGCGT TCTTTCAGAG GCGTGCCGGA
GCGTGGGTGC CCACCACCTG GAAGGGCTAT GCGAACGCAG TCTGTTCCGT ATCCGCAGCC
CTCGGCGCGG CCGGTGTCGC ACGAGGCGAT CGGATTGCCA TCATGGGCGA CGTATCGCAG
GAGTGGCTGA TTGCCGACAT GGCGACGATC TGCTCGGGCG CGGTGACGGT AGGCGTCTAT
TTCACCGCGT CGGTCGAAGA GGTGCGCTAC TACCTGGAGG ATTCAGGGGC GACACTCGCT
TTTGCCGGAA GTGCCGAACA GCTTCGGGTC ATGAAAGCGG CCGATACGTC CAGCCGGCTC
CTCAAGATCG TGGTGCTCGA TCCGGACTGG AAGCGCTCGC CTGACGAAAC CGGCATGAAT
GTCGTTTCAC TCGCCGAGTT CGCGTCGCAT TTTGACGGCG ACGAAGTCGC TTATCTGCGT
GAGCAGTCAG AGCTTGCGCG GCCGACGGAC CTGGTGAGCC TGGGTTACAC CTCGGGAACC
ACGGGGGCGC CGAAAGGCGC GATGCTGACG CACGTGTCGA TGCTCGCGGG CGCGTTCACG
TGGCCGACCT TCTGTCCGGC GATATTGTCC GAACCGCAGC GCATGGTGAT CCATCTGCCG
CTTTCGCACA CGGTCGCGCG CATTCAGGCG ACGACGCTGC CGTTGATCGC GAAGACGGTA
CCTTACTTCG TCGACGTGTC GGCCGATTTC GCGAAGTGCA TTCAGGAAGT CAGACCGACG
TCCTATATGG CGCCGCCGCG CTTCTATCAG AAGTTCGCGA CCCAGATCAT CAACCACGTG
AACGGCAGCA GCGAAGCCGA GCGGAGAAAC TACACGCTCG CGCTCGGCAT CGCGCGGGAA
GTGCTGGCCG ATCGCCAGGA TGCAGGCACG GGCGACCCGT TCAAGGAACA GCTCTACGCC
ATCTGCCGTG AGCACGTGTT CAAGCCGTTG CTGGCCAGAA TCGGCTTCGA CGATTTGCGC
TATCCGTACA CGGCCTCCGC TCCGGTGCCG CCCGAGGTCG TCACGCTGTT TCAGTTGTGG
GGCGTCAACC TGAAAGAGAA TTACGGGCAA ACGGAGATGG TCGGCGGCAA CCTCGCGCAG
GTGACCGACT GGTCGAGGCC CGGCAACTCC GGCGTCCCGC TCGACGACCC CGCCTGGGAA
ACCCGCGTGT TGCCGGACGG CGAAATGATC GTTCGGGGGC CGGGGCTGTT CATCGGCTAC
TGGAACAAGG AAGCCGAAAC GAAGGCCGCG CTGCGGGACG GCTGGCTGTA CACCGGCGAT
ATCGTCGACG TCGGCGCGGA CGGGTCGTAC AAGCTGATCG ATCGAAAGAA GGAGCTCATC
AATACGGCCG CCGGCAAATC GATCAGCCCG GTGCAGGTCG AAAACGAACT GCGCCAGAGT
CCGTACATTA CCGAGGCACT CGTGATCGGC GAAGGGCGCA AGTATCTGAC GGCGTTGATC
GAAGTCGACG GCACGCTCGC CATGGACTGG GCCAGGACGC ACGACCCGTC GGTCACGCAG
TACGCCGATC TGGCCAGTTC GCAGCCCGTT ATCGACCTGA TCCGTGAAGA AGTGGAAAAG
GCAAATGCGA GGTTGGCGCG CGCGGAGCAG ATCAAGGCGT TCAGGATATT CCCCGAGGAA
CTCACACCGG AAAACGGCGT GATGACCGCC ACGCGCAAGA AACGCCGCAA GGCATTGATG
GCACGCTACG CGCACATTAT TGCCGGCCTT TACGACGATG CCGAAGAGCA GTTGATCAAG
GAGCAGCTCG TCGGTTCAGG GACAGCAGCG TCCGTTCACC GGCAATAG
 
Protein sequence
MSAAPWTSGN QFATTTIPAL LIERVKNDAD ANAFFQRRAG AWVPTTWKGY ANAVCSVSAA 
LGAAGVARGD RIAIMGDVSQ EWLIADMATI CSGAVTVGVY FTASVEEVRY YLEDSGATLA
FAGSAEQLRV MKAADTSSRL LKIVVLDPDW KRSPDETGMN VVSLAEFASH FDGDEVAYLR
EQSELARPTD LVSLGYTSGT TGAPKGAMLT HVSMLAGAFT WPTFCPAILS EPQRMVIHLP
LSHTVARIQA TTLPLIAKTV PYFVDVSADF AKCIQEVRPT SYMAPPRFYQ KFATQIINHV
NGSSEAERRN YTLALGIARE VLADRQDAGT GDPFKEQLYA ICREHVFKPL LARIGFDDLR
YPYTASAPVP PEVVTLFQLW GVNLKENYGQ TEMVGGNLAQ VTDWSRPGNS GVPLDDPAWE
TRVLPDGEMI VRGPGLFIGY WNKEAETKAA LRDGWLYTGD IVDVGADGSY KLIDRKKELI
NTAAGKSISP VQVENELRQS PYITEALVIG EGRKYLTALI EVDGTLAMDW ARTHDPSVTQ
YADLASSQPV IDLIREEVEK ANARLARAEQ IKAFRIFPEE LTPENGVMTA TRKKRRKALM
ARYAHIIAGL YDDAEEQLIK EQLVGSGTAA SVHRQ