Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3241 |
Symbol | |
ID | 4453652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 77415 |
End bp | 78587 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639695306 |
Product | porin |
Protein accession | YP_836879 |
Protein GI | 116691346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.535768 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA AAAAAATCGA AATCATTGTC GGCTCGCTCG TGGGGCTGGC CAGTTCCGTC GCGCATAGCC AGAGCAGCGT CACACTCTAT GGCGAGATCG ACAACGGCAT TCATTACCAG ACCAACGTAG GCGGCGGCAA AGCCGTCTAC ATGGACTCGC TGGACGGCAT CGACGGCAGC CGCTGGGGGC TGACCGGCAA GGAAGACCTG GGTGGCGGTC TCAAGGCGAT TTTTACGCTC GAGTCCGGCA TCAACGTGAA CAACGGACAG TTTGCCCAGG GCGGCACGGC GTTCGGCCGG CAGGCTTTCG TCGGACTGAG CAGCGACACT TACGGCTCTC TCACCGCCGG CCGTCAATAC GACATGGTGT GGTATTTCCC CGAGTTTCTT GCCGGATCCG CGGCGGTTGG CGACCTGCCG AGCGCGCATC CGGGAGATTT CGACAACACC AGCAACAGCG TGCGATTCAA CAACTCCGTG CGCTACATGA GCCCGGACTT CCGCGGCTTC TCCTTTGGCG TCGAATATAG CCTTGGCGGC GTACCCGGCG ACTTCACGTC GATGTCGGGC TATTCGCTTG GAGTCGGTTA CACACACGGT CCGCTTCAGA TCGGCGCGGC GTTCGATTAC TTCAAACACC CGACCTCGAC GCCAGGCAAC GGATGGTTCA CCAACTATGC AAGCGGCTTC AATCTGCTGG CCTCCTCTCT GAACTCGGCC TATCAGGTCG CGCAGGCCTA TCAGGACGCC GTCATCGCGG CGGCCTACAC GATCGGAAAC GCGACGATCA GCGCATCGTA TTCGAACGTT CAATACGCCA ATCTCGGTGC GGGGTTCATG AACGGTACCG CCGTCTTCAA CAACTACGAC ATCGGGTTGA ACTACCGTGT CACGCCGGTC TTTTTCGTCG GCGTCGCGTA CGACTACATG AACGCGCGGA GCGTCACGAC GGCACAAGGC AATGCCGTCG GCAACCAGCA CTACAATCAG GTGGCGTTCA CGCTGGATTA TCTGCTGTCG AAGCGTACCG ACGTGTACTT CTCCGGCGGC TGGCAGCGCG CTTCGGGCAC ATCGTCGACG GGCGCGCCAG CCGTCGCCAA CATCGGCGGC TCCGGAGATT CGTCGAATAA CCACCAGATG GTTTATCGGC TCGCTATACG ACATAAGTTC TGA
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Protein sequence | MKTKKIEIIV GSLVGLASSV AHSQSSVTLY GEIDNGIHYQ TNVGGGKAVY MDSLDGIDGS RWGLTGKEDL GGGLKAIFTL ESGINVNNGQ FAQGGTAFGR QAFVGLSSDT YGSLTAGRQY DMVWYFPEFL AGSAAVGDLP SAHPGDFDNT SNSVRFNNSV RYMSPDFRGF SFGVEYSLGG VPGDFTSMSG YSLGVGYTHG PLQIGAAFDY FKHPTSTPGN GWFTNYASGF NLLASSLNSA YQVAQAYQDA VIAAAYTIGN ATISASYSNV QYANLGAGFM NGTAVFNNYD IGLNYRVTPV FFVGVAYDYM NARSVTTAQG NAVGNQHYNQ VAFTLDYLLS KRTDVYFSGG WQRASGTSST GAPAVANIGG SGDSSNNHQM VYRLAIRHKF
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