Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3224 |
Symbol | |
ID | 4453635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 64595 |
End bp | 65302 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639695290 |
Product | pirin domain-containing protein |
Protein accession | YP_836863 |
Protein GI | 116691330 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.911223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC ATCGGCCTTT TCCTTCGCTT GACGCAATCC GGCGCGACGG CGTTGATGTC CGCCAACATT TCCGCGCGGG CGACGTCGGG CACGCCGACC ATGCGCCGCT CGGTCCGCTC CATATGTGGA ACGACATCGA ATTCGCGCAG CACGCGGGCC TCGGGCTTCG TGTTCACCGC GACGTCGAGA TCGTCACGTG GGTACGTTCG GGGGCCATCA CCCACGAAGA CGATGCGGGC AATCGCGCGC GCCTGGTTGC CAACTGCGTC CACGTGATGA GTGCCGGCAC GGCGATCCAT CATGCCGAGC GCAACGAGGA AAACATACCC GCGCGGCAGT TTCAGATCTG GCTCCGTCCG CGCACACCGG CCGGTACGCC GCGCTGCTCG ACGCGGGTCT GTTCGCCAGG ATGTCGAGAG GGCCGATTCG TCACACTGGC GAGCGGCGAT CCGGAGGATG TCCGCACGGG TGCTTTGCCC CTCCATGCCG ACGCGCGGGT GCGTATCGCG ACGCTGCGCG AAGGCGCGGC AATGCAGCAC GTTTTGCCGA TGCCCGGTTC GGCTTATTTG GTTGCGGATC ATGGGCGACT GGACATAGGG CCGATCAGGC TGACGCGACG CGATGGCATT GCCGTTCGAG ATGAAGCGCG GCTCGTATTG AGGGCGCGAG ACGACACTGA TGTCGTGATT GTTGAGCTCT TGCGCTAG
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Protein sequence | MIEHRPFPSL DAIRRDGVDV RQHFRAGDVG HADHAPLGPL HMWNDIEFAQ HAGLGLRVHR DVEIVTWVRS GAITHEDDAG NRARLVANCV HVMSAGTAIH HAERNEENIP ARQFQIWLRP RTPAGTPRCS TRVCSPGCRE GRFVTLASGD PEDVRTGALP LHADARVRIA TLREGAAMQH VLPMPGSAYL VADHGRLDIG PIRLTRRDGI AVRDEARLVL RARDDTDVVI VELLR
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