Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3212 |
Symbol | |
ID | 4453585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 52222 |
End bp | 52980 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639695278 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_836851 |
Protein GI | 116691318 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAG AGAAAAAAAT CGCGGCGGTG ACGGGTGCCG GCACCGGCAT CGGACAGGCC GCTGCGGTAG CGCTCGCGCA AGCCGGCTTC AGCGTCGCGC TGCTCGGCCG GCGCATCGAT CCGCTACTCG CGACGCAAGA GATCATCGAG CTGGCCGGGG GCGTCGCAGC GGCGATTCCA ACCGACGTGT CCGACGAAAC GTCGGTCGAT GCGAGCTTCA CGCGGATTGC GCATGACTTC GGCCGCCTCG ACGTGCTGTT CAACAACGCG GGCCGCAACG CAGGCGCCGT GCCGCTCGAC GATTATTCGC TTGAGTTCTG GAACGACGTG GTCGCCACCA ACCTGACCGG CGTGTTCCTG TGCGCCCGCG CCGCGTGGCG CCAGATGAAG CGCCAGACGC CGCAAGGCGG CCGCATCATC AACAACGGTT CGATCTCCGC GCACACGCCG CGCCCGCACA CGATCGCGTA CACGGCCACG AAGCACGCGG TCCTCGGCAT CACGCGTTCG CTTGCCCTCG ACGGTCGACC GTTTAACATC GCCTGCGGCC AGATCGATAT CGGCAACGCC GCGACCTCGC TCACGGAGCG CATGGACAGC GGCGTGCTGC AGGCCGACGG CCGCATCGCG CCCGAGCCGC GCGTCGACGT CGTGCATGTC GCGAGCGCGA TCGTGCAGAT GGCGAGCCTG CCGCTCGAAG CGAACATTCT GAACATGACG ATCATGGCAA GCGCGATGCC CTTCGTCGGA CGCGGCTGA
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Protein sequence | MQAEKKIAAV TGAGTGIGQA AAVALAQAGF SVALLGRRID PLLATQEIIE LAGGVAAAIP TDVSDETSVD ASFTRIAHDF GRLDVLFNNA GRNAGAVPLD DYSLEFWNDV VATNLTGVFL CARAAWRQMK RQTPQGGRII NNGSISAHTP RPHTIAYTAT KHAVLGITRS LALDGRPFNI ACGQIDIGNA ATSLTERMDS GVLQADGRIA PEPRVDVVHV ASAIVQMASL PLEANILNMT IMASAMPFVG RG
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