| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3199 |
|---|
| Symbol | |
|---|
| ID | 4453572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 39174 |
|---|
| End bp | 39818 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639695265 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_836838 |
|---|
| Protein GI | 116691305 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.529866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC ATGAAGCCAT GCATCCGCCG GAGGCCGGGT CCGTCGTCGC GATCGTCGAC
GACGACGAAG CCGTGCGCGA CGGCCTCGCG CTGCTGCTGT GGACCGTCGG CTTGCGCACC
CGCCGTTTCG CCGATGCGCA CGCGTTTCTC GCGGAAGCCG ACGACAGCAC GCTCGGCTGC
GTGCTGCTCG ACCTGCGGAT GCCGGGGATG AGCGGGCTCG ACGCGCTCGA TTGTCTCGCC
GGCCGGCGTA GCCTGCCGGT GATCGTGCTG ACCGGCCATG GCAACGTCGA TGCGTGCCGG
CGTGCGTTCA AGCGCGGCGC GTGCGATTTC CTGCGCAAGC CGGTCGACGA CGACGAACTG
ATCGACGTGG TCCAGCAGGC GCTGCGCGGG CACGCGGACC GGCGCGACGG CGACGCGGCG
GAACAGGCCC GCGCGAGCCG GATGGCGACG CTGAGCGCGC GCGAGCGCGA CGTGCTCGAC
GGCATCGTGC GCGGCGGCAG CAACAAGGCA ATCGCGCGCG ATCTCGGGCT GTCGCCGCGC
ACGGTCGAGA CGTATCGCGC GAACCTGTTC GACAAATTGC AGGTCGCGTC GCTCGTCGAG
CTGGTGCGCG ACTACGCGGC GCTCGCGGGC GTATCGGCGA CGTAG
|
|---|
| Protein sequence | MSTHEAMHPP EAGSVVAIVD DDEAVRDGLA LLLWTVGLRT RRFADAHAFL AEADDSTLGC
VLLDLRMPGM SGLDALDCLA GRRSLPVIVL TGHGNVDACR RAFKRGACDF LRKPVDDDEL
IDVVQQALRG HADRRDGDAA EQARASRMAT LSARERDVLD GIVRGGSNKA IARDLGLSPR
TVETYRANLF DKLQVASLVE LVRDYAALAG VSAT
|
|---|
| |