Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3192 |
Symbol | |
ID | 4453565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 31723 |
End bp | 32847 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639695258 |
Product | secretion protein HlyD family protein |
Protein accession | YP_836831 |
Protein GI | 116691298 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CTGCCGTACC CGAAAAAGCC AAAACCGCCC GGTTCTCCCG GCGCCAACTG ATCGCCGCGG GCGTCGTGCT CGCCGTCATC GCGCTCGCCG TGTTCGGCTG GCACTGGTGG ACCGTCGGCC GTTTCATCGA AAGCACCGAC GACGCGTATG TCCGCGCCGA CGTCGTGACC GTCAGCTCCC GCGTGTCGGG TTACGTCACG CAGGTGGCGG TCGACGACAA CCAGCCGGTG AAGCGCGGCG ACGTGCTCGT GCGGCTCGAC GACCGCGACT ATCGCGCGAA GGTCGACGAT GCGCAGGCCG CCGTCGCGGC GGCCGACGCG ACGCTGCAGG CCGAGCAGGC GGCGGCCGCG ATGCTCGACG CGCAGATCGG CCAGCAGCGC AGCCAGATCG CGCAGGCCGA CGCCGATGCG GCCGCCGCGC GCGCCGAAGC CGCGCGGCGC GACGCCGATG CGACGCGCTA CAAGCAACTG CTGGCCGAAT CCGCCGCGAG CGGGCAGCGC TGGGAGCAGG CCCATGCGGA CGCATTGAAG GCGCGCGCCG AGCTGACCCG CGCCGGCGCG GCCGTGCGGG TGCAGACCGA CCAGCAGACC GTGCTGCAGC GCCGCCGCGA ACAGAGCACC GCGGCGATCG CGCAGGCACG CGCCCGGCTT GCGGCGGCCC AGGCGAAGCT GGCGCTCGCG CAACTCGATC TCGACCACAC GGTGATCCGG GCGACGCGCG ACGGCAGCGT CGGCCAGCGC GCGGTGAGAG CCGGCCAGTA CGTCGAAGTC GGGATGCCGC TGCTCGCGGT GGTGCCGCTG AGCGACGTGT ACGTGGTGGC GAACTTCAAG GAAACGCAGT TGGGCGCGAT GCACGACGGC CAGCCCGTCC AGATCGACGT CGACACCTAT TCGGGCCATA CGCTGCACGG CCGCGTGATC GGCCTCGCGC CGGGCTCGGG CGCGCAGTTC GCGCTGCTGC CGCCGGACAA CGCGACCGGC AACTTCACGA AGATCGTGCA GCGCATCCCG GTGAAGATCC GCGTCGATAC GCCGCCGGCC GGCGTCGTGC TGCGGCCCGG GATGTCCGTG ATCGCGCGCG TCGACACGCG CGGCACGCAG GGGGCCGGCT CGTGA
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Protein sequence | MSTTAVPEKA KTARFSRRQL IAAGVVLAVI ALAVFGWHWW TVGRFIESTD DAYVRADVVT VSSRVSGYVT QVAVDDNQPV KRGDVLVRLD DRDYRAKVDD AQAAVAAADA TLQAEQAAAA MLDAQIGQQR SQIAQADADA AAARAEAARR DADATRYKQL LAESAASGQR WEQAHADALK ARAELTRAGA AVRVQTDQQT VLQRRREQST AAIAQARARL AAAQAKLALA QLDLDHTVIR ATRDGSVGQR AVRAGQYVEV GMPLLAVVPL SDVYVVANFK ETQLGAMHDG QPVQIDVDTY SGHTLHGRVI GLAPGSGAQF ALLPPDNATG NFTKIVQRIP VKIRVDTPPA GVVLRPGMSV IARVDTRGTQ GAGS
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