| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3191 |
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| Symbol | |
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| ID | 4453564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 30170 |
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| End bp | 31663 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639695257 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_836830 |
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| Protein GI | 116691297 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTC CGTCCATTCC GTCCGCTTCG CCCGTTTCTC CCGCCGTCGA GACACGCTTG
CCGCGCGTGC GGCGCGCCAC CTGTGCGGCC GTGCTGCTGG CGTCGGCCGC GCTGGCCGCG
TGTTCGGTCG GCGAGCCGTA TCGGCCGCCG GTGTCCGACG CGACGCGCAC CGGGCCGTTT
GACGCGGTGG CCGACGTGCC GGCCGCGGCC GCCGGCGAAC CGCCGCAACG CTGGTGGCGG
CTGTACGACG ATCCCGTACT CGACGGCCTC GTGCGCGATG CGCTGGCGCA GAACCGCGAT
CTCGCCGCGG CCGTCGCGCG GGTCGAGCGT GCGCGTGCCG TGTTCGACGA GGCGGGCGCC
GCGCGGTTGC CCGACACGAC GGCCGGCTTC GGCGTCGACT ACGGCAAGCA CGCGCCCGAC
CAGATCGTTG CGGCGGCCAA GGACACCGAT GCGCGCACGC GCTGGGGTTT CGCGCCGTCG
TTCTCGCTGT CGTGGGAAGT CGATCTGTGG GGCCGCGTGC GCCATCTGGT CGACGCCGCG
CAGGCCGACG CCGACGCGGT GCAGGCCGCG TCCGATGCGA TGCGCGTCGT GGTGGCCGCC
GAGACGACGG CCGCGTATGC GCAGGTGTGC GCATACGGCG AGCGGATCGA CGTGGCCGAG
CAGTCGGTCG GCATCGCGGA CCGGCTGGCC GCGCTGACGG CGAAGCAGCG CGCGCACGGG
CTCGTGTCCG ACCTCGAAGT GGCGCGTTCG CGCGCGTTCG CCGACGATAC GCGCGCCGAT
TTGCCGGCGC TCGTCGGCTC ACGGCGCGCG GCGCTGTACG AACTGGCGGT GCTGACCGGG
CGCGCGCCCG GCGCGCTGCC CGACGCCGCC GCGCATTGCC GCACCGCGCC GATGCTCGCT
CGGCCGTTCC CGGTCGGCGA CGGCGCGTCG CTGCTGCGCC GTCGCCCCGA CCTGCGCGAG
AGCGAGCGCC AACTGGCCGC CGCGAATGCG CGGATCGGCG TGGCGACGGC CGAGCTGTAT
CCGTCGATTT CGCTCGGCGG CTCGGTGAAC TGGCTGTCGA CCGGCGGCGA TCCGTCGACG
CTCGGCGACA AGTACGCGAT CGCTTGGGGC GTCGGCCCGC TGATCACGTG GCGCTTTCCG
AACATGGCGG TGAGCCGCGC GCGGCTCGCG CAGGCCCGCG CCGACGACAC GCTCGCCCGT
GCGCAATTCG ATGCGCAGGT GCTGCGCGCG CTGAAGGAAA CCGAGCAGGC GCTGGCCCGC
TACGGCGCCG CGTGGCGCCG CCGCGCCGCG CTCGAAACCG CGCGTGCCGA GCATGCGCGC
GCCTATCGCC TCGCCGAGCT GAACTACGAA GCCGGCGCCC TCGATTTCCT CGGCGTGCTC
GACGCGCAGC GCAGCCTCGT CGCGGTCGAT TCGGCGCTGG CCGAGTCGAC GCAGCAGGTC
TCGCTCGACC AGGTCGCCGT GTTCAAGGCG CTCGGAGGCG GCTGGCAACC GTAG
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| Protein sequence | MRVPSIPSAS PVSPAVETRL PRVRRATCAA VLLASAALAA CSVGEPYRPP VSDATRTGPF
DAVADVPAAA AGEPPQRWWR LYDDPVLDGL VRDALAQNRD LAAAVARVER ARAVFDEAGA
ARLPDTTAGF GVDYGKHAPD QIVAAAKDTD ARTRWGFAPS FSLSWEVDLW GRVRHLVDAA
QADADAVQAA SDAMRVVVAA ETTAAYAQVC AYGERIDVAE QSVGIADRLA ALTAKQRAHG
LVSDLEVARS RAFADDTRAD LPALVGSRRA ALYELAVLTG RAPGALPDAA AHCRTAPMLA
RPFPVGDGAS LLRRRPDLRE SERQLAAANA RIGVATAELY PSISLGGSVN WLSTGGDPST
LGDKYAIAWG VGPLITWRFP NMAVSRARLA QARADDTLAR AQFDAQVLRA LKETEQALAR
YGAAWRRRAA LETARAEHAR AYRLAELNYE AGALDFLGVL DAQRSLVAVD SALAESTQQV
SLDQVAVFKA LGGGWQP
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