Gene Bcen2424_3112 details

Gene Information

• Locus tag: Bcen2424_3112
• ID: 4448643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 3426330
• End bp: 3426842
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639695178
• Product: rod shape-determining protein MreD
• Protein accession: YP_836753
• Protein GI: 116691130
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.222418
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGCC CGCAATACAT CCTGCAGCCG GTCAATCCGT ACTTCATCGT CTTCAGCCTC 
GCCGCCGCGT TCCTGCTGAA CCTGATGCCA TGGGGCCGCC TGCCCGGCGT GCCCGATTTC 
GTCGCGCTCG TGCTGCTGTT CTGGAACATC CACCAGCCGC GCAAGGTCGG GATGGGCGTT 
GCGTTCGCGC TCGGCATCCT GATGGACGTG CACGACGCGG GGCTGCTCGG CGAGCACGCG 
CTCGCCTATA CGCTGCTGTC GTACGGCGCG ATCACGATCC ACCGCCGCGT GCTGTGGATG 
CCGATCGGCG TGCAGGTGCT GTACGTCACG CCGCTGCTGG TCGCCGCGCA GCTCGTGCCG 
TTCGTGATCC GCCTGCTGAT GGGCGCCGCG TTCCCCGGCT GGCGCTATCT CGTCGACGGT 
TTCGTCGAAG CCGCGCTGTG GCCGATCGCG AGCCACCTGC TGCTGATGCC GCAACGCCGC 
CCGGTCGACC CGGACGATAC GCGCCCGATC TGA 

 

Protein sequence

MNRPQYILQP VNPYFIVFSL AAAFLLNLMP WGRLPGVPDF VALVLLFWNI HQPRKVGMGV 
AFALGILMDV HDAGLLGEHA LAYTLLSYGA ITIHRRVLWM PIGVQVLYVT PLLVAAQLVP 
FVIRLLMGAA FPGWRYLVDG FVEAALWPIA SHLLLMPQRR PVDPDDTRPI