Gene Bcen2424_3068 details

Gene Information

• Locus tag: Bcen2424_3068
• ID: 4448061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008542
• Strand: +
• Start bp: 3382540
• End bp: 3382998
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639695134
• Product: flagellar export protein FliJ
• Protein accession: YP_836709
• Protein GI: 116691086
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00481055
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCACG GCTTTCCCCT TCAGTTGCTG CTCGACCGCG CGCAGGAAGA CCTCGACTCG 
GCCGCGAAGC AGCTCGGCAC CGCGCAGCGC GACCGCACCG CGGCGGCCGA ACAGCTCGAC 
GCACTGCTGC GCTATCGCGA CGAATATCAC GCGCGCTTCG CGCAATCCGC GCAGAGCGGC 
ATGCCGGCCG GCAACTGGCG CAATTTCCAG GCGTTCATCG ACACGCTCGA TGCCGCGATC 
GCGCAGCAGC GCACCGTGCT CGCCGCGGCC GAAGTCCGCA TCGACGAGGC GCGGCCGAAC 
TGGCAGCAGA AGAAACGTAC CGTCGGCTCG TATGAAATCC TGCAGGCGCG CGGCGTCGCG 
CAGGAAGCGC AGCGCGACGC CCGGCGCGAA CAGCGCGACG CCGACGAACA TGCCGCGAAG 
ATCCTGCGCA TGCGGGCCGA CGCGGCCCGT TCGTCGTAA 

 

Protein sequence

MAHGFPLQLL LDRAQEDLDS AAKQLGTAQR DRTAAAEQLD ALLRYRDEYH ARFAQSAQSG 
MPAGNWRNFQ AFIDTLDAAI AQQRTVLAAA EVRIDEARPN WQQKKRTVGS YEILQARGVA 
QEAQRDARRE QRDADEHAAK ILRMRADAAR SS