| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3067 |
|---|
| Symbol | |
|---|
| ID | 4448060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 3380993 |
|---|
| End bp | 3382534 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639695133 |
|---|
| Product | flagellar protein export ATPase FliI |
|---|
| Protein accession | YP_836708 |
|---|
| Protein GI | 116691085 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0128753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGCT CGCCCGAGGC GCTCGCGCAC GACGGCATGA CGCCGCTCGA ACGCGAGCTC
GCGCTCGCGT CGTTCGGGCC GGCGGCCGCG CACGATGCCG CGGACGACGC CACGCCGCAC
GCAGCATCCG ACGCCGCCGA CGCCGCCCCG CGCGCGCCGC ACAATCCGCA TCTCGCGCAC
TGGCGCACGC ACCTGAACGG GCTCGCCGCG CGCAGCCACC GCGCGCTGCC GCTGCGGCCG
TGCGGACGCC TCACGCGCGC GGCCGGCCTC GTGCTCGAGG CGATCGGGCT GCGCCTGTCG
GTCGGCGCCG AATGCACGAT CGAGTTGCCG CCCGGCAGCA CGCTGCCGCA CGCGGAAGCC
GAAGTCGTCG GCTTCGCCGG GGACCGCCTG TTCCTGATGC CGACCACCGA CGTTGCGGGC
GTGTTGCCCG GCGCACGCGT GTGGCCGCGC GAGAGCGCGC CCGTCACCGA TCCGCTCGCC
GGCGCGAAGC GGCTGCCGGT CGGCTGGGAG ATGCTCGGGC GCGTCGTCGA CGCGTCGGGC
CGCCCGCTCG ACGGCCTCGG CCCGCTCGCG TCGAAAGTCG ATGCGCCGCT GTCGGCGCCG
TCGATCAACC CGCTCGATCG CGAGCCGATC CACCACGTGC TCGACGTCGG CGTGCGCGCG
ATCAACGCGC TGCTCACCGT CGGCCGCGGC CAGCGGATGG GCCTGTTCGC CGGCTCCGGC
GTCGGCAAGT CGGTACTGCT CGGCACGATG GCGCGCTATA CGAGTGCGGA AGTGATCGTG
ATCGGCCTGA TCGGCGAACG CGGCCGCGAA GTGAAGGAAT TCATCGAACA GATCCTCGGC
GAGGACGGGC TCGCGCGCTC GGTCGTCGTC GCGGCGCCGG CCGACGTGTC GCCGCTGTTG
CGGATGCAGG GCGCCGCGTA CGCGACGTCG CTCGCCGAGT ATTTCCGCGA CCAGGGCAAG
CACGTGCTGC TGCTGATGGA TTCGCTGACG CGCTATGCGA TGGCGCAGCG CGAGATCGCG
CTGGCGATCG GCGAGCCGCC CGCGACGAAA GGCTATCCGC CGTCGGTGTT CGCGAAGCTC
CCCGCGCTCG TCGAGCGCAC CGGCAACGGG CCCGAAGGCG GCGGCTCGAT CACCGCGTTC
TACACGGTGC TGACCGAAGG CGACGACCAG CAGGACCCGA TCGCCGATTC GGCGCGCGCG
ATCCTCGACG GCCACATCGT GCTGTCGCGC GCGCTCGCCG AGGCCGGCCA CTATCCCGCG
ATCGACATCG AGGCGTCGAT CAGCCGTGCG ATGACCGCGC TGATCGACGA AACGCATCTC
GACCACGTAC GGCAGTTCAA GCAGATGCTG TCGCGCTACC AGCGCAACCG CGACCTGATC
GCGGTCGGCG CCTACGCACC GGGCCGCGAC GCGCAGCTCG ACCGCGCGAT CGCGCTCTAC
CCGCGCATCG AAGCGTTCCT GCAGCAGGGC TTTCGCGAAT GCGCGCCGTT CGCATCGAGC
CTCACCGCGC TCGATGCGCT GTTCGACGCT TACGGAGGCT GA
|
|---|
| Protein sequence | MTRSPEALAH DGMTPLEREL ALASFGPAAA HDAADDATPH AASDAADAAP RAPHNPHLAH
WRTHLNGLAA RSHRALPLRP CGRLTRAAGL VLEAIGLRLS VGAECTIELP PGSTLPHAEA
EVVGFAGDRL FLMPTTDVAG VLPGARVWPR ESAPVTDPLA GAKRLPVGWE MLGRVVDASG
RPLDGLGPLA SKVDAPLSAP SINPLDREPI HHVLDVGVRA INALLTVGRG QRMGLFAGSG
VGKSVLLGTM ARYTSAEVIV IGLIGERGRE VKEFIEQILG EDGLARSVVV AAPADVSPLL
RMQGAAYATS LAEYFRDQGK HVLLLMDSLT RYAMAQREIA LAIGEPPATK GYPPSVFAKL
PALVERTGNG PEGGGSITAF YTVLTEGDDQ QDPIADSARA ILDGHIVLSR ALAEAGHYPA
IDIEASISRA MTALIDETHL DHVRQFKQML SRYQRNRDLI AVGAYAPGRD AQLDRAIALY
PRIEAFLQQG FRECAPFASS LTALDALFDA YGG
|
|---|
| |